{"id":18568860,"url":"https://github.com/gijzelaerr/kliko","last_synced_at":"2025-04-10T06:31:49.746Z","repository":{"id":62574355,"uuid":"51143049","full_name":"gijzelaerr/kliko","owner":"gijzelaerr","description":"Scientific Compute Container Specification and Support Library","archived":false,"fork":false,"pushed_at":"2017-01-12T12:40:52.000Z","size":3318,"stargazers_count":11,"open_issues_count":6,"forks_count":1,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-03-24T16:48:06.137Z","etag":null,"topics":["containers","docker","python","science"],"latest_commit_sha":null,"homepage":"http://kliko.readthedocs.org","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/gijzelaerr.png","metadata":{"files":{"readme":"README.rst","changelog":"CHANGELOG.rst","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-02-05T11:33:34.000Z","updated_at":"2019-03-27T06:53:30.000Z","dependencies_parsed_at":"2022-11-03T18:51:07.137Z","dependency_job_id":null,"html_url":"https://github.com/gijzelaerr/kliko","commit_stats":null,"previous_names":[],"tags_count":11,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gijzelaerr%2Fkliko","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gijzelaerr%2Fkliko/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gijzelaerr%2Fkliko/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gijzelaerr%2Fkliko/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/gijzelaerr","download_url":"https://codeload.github.com/gijzelaerr/kliko/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248168259,"owners_count":21058800,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["containers","docker","python","science"],"created_at":"2024-11-06T22:30:49.605Z","updated_at":"2025-04-10T06:31:45.908Z","avatar_url":"https://github.com/gijzelaerr.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"=============================================================\nKLIKO - Scientific Compute Container Specification and Parser\n=============================================================\n\nAbout\n-----\n\nKLIKO is a specification, validator and parser for the KLIKO Scientific Compute Container\nspecification. It enables a developer of scientific software to structure the input,\noutput and parameters of a dockerized compute task. KLIKO is written in Python.\n\n\nInstallation\n------------\n\nYou can install Kliko inside a docker container or just on your system::\n\n    $ python setup.py install\n\n\nor from pypi::\n\n    $ pip install kliko\n\n\nUsage\n-----\n\nfrom a Python script inside a container::\n\n    from kliko.validate import validate\n    parameters = validate()\n\nor to check if a kliko file has a valid syntax::\n\n    $ kliko-validate /kliko.yml\n\nor try to run the docker image from the examples folder directly::\n\n    $ kliko-run kliko/minimal --help\n\n        usage: kliko-run [-h] [--target_folder TARGET_FOLDER] --choice {second,first}\n                         --char CHAR [--float FLOAT] --file FILE --int INT\n                         image_name\n\n        positional arguments:\n          image_name\n\n        optional arguments:\n          -h, --help            show this help message and exit\n          --target_folder TARGET_FOLDER\n          --choice {second,first}\n                                choice field (default: second)\n          --char CHAR           char field, maximum of 10 chars (default: empty)\n          --float FLOAT         float field (default: 0.0)\n          --file FILE           file field, this file will be put in /input in case of\n                                split io, /work in case of join io\n          --int INT             int field\n\n\nDocumentation\n-------------\n\nThe documentation can be found on http://kliko.readthedocs.org\n\n\nExample\n-------\n\nThere are examples of a kliko and parameters file in the ``examples`` folder.\n\n\n\nTravis build status\n-------------------\n\n.. image:: https://img.shields.io/travis/gijzelaerr/kliko.svg\n    :target: https://travis-ci.org/gijzelaerr/kliko\n\n.. image:: https://img.shields.io/coveralls/gijzelaerr/kliko.svg\n    :target: https://coveralls.io/github/gijzelaerr/kliko?branch=master\n\n.. image:: https://img.shields.io/pypi/v/kliko.svg\n     :target: https://pypi.python.org/pypi/kliko\n\n.. image:: https://img.shields.io/pypi/pyversions/kliko.svg\n     :target: https://pypi.python.org/pypi/kliko\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgijzelaerr%2Fkliko","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgijzelaerr%2Fkliko","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgijzelaerr%2Fkliko/lists"}