{"id":22748222,"url":"https://github.com/githubfoam/openhpc-sandbox","last_synced_at":"2025-03-30T05:42:59.186Z","repository":{"id":62699421,"uuid":"260859574","full_name":"githubfoam/openhpc-sandbox","owner":"githubfoam","description":"openhpc","archived":false,"fork":false,"pushed_at":"2020-09-16T21:48:33.000Z","size":15091,"stargazers_count":0,"open_issues_count":2,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-02-05T07:49:47.744Z","etag":null,"topics":["benchmark","high-performance-computing","high-throughput-computing","hpc-cluster","pipeline"],"latest_commit_sha":null,"homepage":null,"language":"Shell","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/githubfoam.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2020-05-03T08:29:04.000Z","updated_at":"2020-09-16T21:48:35.000Z","dependencies_parsed_at":"2022-11-04T17:17:12.396Z","dependency_job_id":null,"html_url":"https://github.com/githubfoam/openhpc-sandbox","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/githubfoam%2Fopenhpc-sandbox","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/githubfoam%2Fopenhpc-sandbox/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/githubfoam%2Fopenhpc-sandbox/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/githubfoam%2Fopenhpc-sandbox/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/githubfoam","download_url":"https://codeload.github.com/githubfoam/openhpc-sandbox/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246281216,"owners_count":20752207,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["benchmark","high-performance-computing","high-throughput-computing","hpc-cluster","pipeline"],"created_at":"2024-12-11T03:21:19.985Z","updated_at":"2025-03-30T05:42:59.167Z","avatar_url":"https://github.com/githubfoam.png","language":"Shell","funding_links":[],"categories":[],"sub_categories":[],"readme":"# openhpc-sandbox\n\n\n[![Build Status](https://travis-ci.com/githubfoam/openhpc-sandbox.svg?branch=master)](https://travis-ci.com/githubfoam/openhpc-sandbox)  \n\n\nnodes(booted together, not sequential)\n~~~~\nmaster01\neth0 : public\neth1 : private\ncompute01\neth0 : public\neth1 : private (MAC)\ncompute02\neth0 : public\neth1 : private (MAC)\n~~~~\n\n~~~~\ninstaller user: vagrant\npasswordless ssh between all nodes\n~~~~\n\n~~~~\nROOT MUST BE (not vagrant)\n\n# initialize PBS path\n. /etc/profile.d/pbs.sh\n# enable user environment propagation (needed for modules support)\nqmgr -c \"set server default_qsub_arguments= -V\"\n# enable uniform multi-node MPI task distribution\nqmgr -c \"set server resources_default.place=scatter\"\n# enable support for job accounting\nqmgr -c \"set server job_history_enable=True\"\n# register compute hosts with pbspro\n\n~~~~\n\n~~~~\n[vagrant@master01 groups.d]$ wwsh file list\ndynamic_hosts           :  rw-r--r-- 0   root root              688 /etc/hosts\ngroup                   :  rw-r--r-- 1   root root              679 /etc/group\nnetwork                 :  rw-r--r-- 1   root vagrant            16 /etc/sysconfig/network\npasswd                  :  rw-r--r-- 1   root root             1590 /etc/passwd\nshadow                  :  rw-r----- 1   root root              983 /etc/shadow\n[vagrant@master01 groups.d]$ wwsh node list\nNAME                GROUPS              IPADDR              HWADDR\n================================================================================\ncompute01           UNDEF               192.168.1.253       08:00:27:e3:b0:01\ncompute02           UNDEF               192.168.1.252       08:00:27:77:86:f5\n[vagrant@master01 groups.d]$ sudo wwsh provision list\nNODE                VNFS            BOOTSTRAP             FILES\n================================================================================\ncompute01           centos7.6       3.10.0-957.1.3.el7... dynamic_hosts,grou...\ncompute02           centos7.6       3.10.0-957.1.3.el7... dynamic_hosts,grou...\n\n[vagrant@master01 ~]$ pdsh -w compute0[1-2] uptime\ncompute01:  13:42:52 up 23 min,  0 users,  load average: 0.00, 0.01, 0.03\ncompute02:  13:42:52 up  3:25,  2 users,  load average: 0.00, 0.01, 0.05\n\n\n[vagrant@master01 ~]$ wwsh vnfs list\nVNFS NAME            SIZE (M)   ARCH       CHROOT LOCATION\ncentos7.6            279.8      x86_64     /opt/ohpc/admin/images/centos7.6\n\n[vagrant@master01 ~]$ pbsnodes -a\ncompute01\n     Mom = compute01.localdomain\n     ntype = PBS\n     state = state-unknown,down\n     pcpus = 1\n     resources_available.host = compute01\n     resources_available.ncpus = 1\n     resources_available.vnode = compute01\n     resources_assigned.accelerator_memory = 0kb\n     resources_assigned.hbmem = 0kb\n     resources_assigned.mem = 0kb\n     resources_assigned.naccelerators = 0\n     resources_assigned.ncpus = 0\n     resources_assigned.vmem = 0kb\n     comment = node down: communication closed\n     resv_enable = True\n     sharing = default_shared\n     last_state_change_time = Sun Jul 28 11:40:41 2019\n\ncompute02\n     Mom = compute02\n     ntype = PBS\n     state = state-unknown,down\n     pcpus = 1\n     resources_available.host = compute02\n     resources_available.ncpus = 1\n     resources_available.vnode = compute02\n     resources_assigned.accelerator_memory = 0kb\n     resources_assigned.hbmem = 0kb\n     resources_assigned.mem = 0kb\n     resources_assigned.naccelerators = 0\n     resources_assigned.ncpus = 0\n     resources_assigned.vmem = 0kb\n     comment = node down: communication closed\n     resv_enable = True\n     sharing = default_shared\n     last_state_change_time = Sun Jul 28 11:40:41 2019\n\n~~~~\nOpenHPC 1.3.8\n~~~~\nInstall guide with Warewulf + PBS Professional (PDF)\nhttps://github.com/openhpc/ohpc/releases/download/v1.3.8.GA/Install_guide-CentOS7-Warewulf-PBSPro-1.3.8-x86_64.pdf\n~~~~\n~~~~\nhttps://github.com/openhpc/ohpc\n~~~~\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgithubfoam%2Fopenhpc-sandbox","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgithubfoam%2Fopenhpc-sandbox","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgithubfoam%2Fopenhpc-sandbox/lists"}