{"id":24669370,"url":"https://github.com/gregspangenberg/armcrop","last_synced_at":"2025-03-21T13:48:08.107Z","repository":{"id":259977508,"uuid":"863584122","full_name":"gregspangenberg/armcrop","owner":"gregspangenberg","description":"A machine learning model that does oriented bounding box cropping of CT scans to any bone of interest in the arm","archived":false,"fork":false,"pushed_at":"2025-03-13T04:39:08.000Z","size":849,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-13T05:27:50.282Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/gregspangenberg.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"license.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-09-26T14:44:44.000Z","updated_at":"2025-03-13T04:39:11.000Z","dependencies_parsed_at":null,"dependency_job_id":"acc30c42-6990-4f55-988d-cb6b44f11e2a","html_url":"https://github.com/gregspangenberg/armcrop","commit_stats":null,"previous_names":["gregspangenberg/armcrop"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gregspangenberg%2Farmcrop","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gregspangenberg%2Farmcrop/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gregspangenberg%2Farmcrop/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gregspangenberg%2Farmcrop/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/gregspangenberg","download_url":"https://codeload.github.com/gregspangenberg/armcrop/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":244807676,"owners_count":20513685,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-01-26T09:29:22.252Z","updated_at":"2025-03-21T13:48:08.080Z","avatar_url":"https://github.com/gregspangenberg.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# *armcrop*\n\n[![PyPI Latest Release](https://img.shields.io/pypi/v/armcrop.svg)](https://pypi.org/project/armcrop)\n[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)\n\nThis package contains a machine learning model that can crop a CT scan to any of the following classes:\n- clavicle\n- scapula\n- humerus\n- radius_ulna\n- hand\n\nIt can do both axis aligned cropping and oriented bounding box (obb) cropping. The obb cropping allows for rigid registration of CT scans.\n\nThis model was trained on arm only scans and proximal half chest scans. A limitation of this model is that when using a full chest CT where the spine is present the model will struggle to differentiate between it and the scapula.\n\n## Installation\nTo use CPU execution install with:\n```\npip install armcrop\n```\nTo use CUDA execution you will need to also install torch and onnxruntime-gpu.\n\n\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgregspangenberg%2Farmcrop","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgregspangenberg%2Farmcrop","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgregspangenberg%2Farmcrop/lists"}