{"id":21203255,"url":"https://github.com/guifernandess7/biostream-genomic-data-analytics","last_synced_at":"2026-05-10T10:17:18.053Z","repository":{"id":245357271,"uuid":"817977472","full_name":"GuiFernandess7/Biostream-genomic-data-analytics","owner":"GuiFernandess7","description":"Genetic Streaming Application: Rust CLI leveraging Websockets and Biopython for near real-time genetic data visualization.","archived":false,"fork":false,"pushed_at":"2024-07-03T18:38:21.000Z","size":52,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-01-21T15:14:01.217Z","etag":null,"topics":["biopython","cli","python","rabbitmq","rust","streamlit"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/GuiFernandess7.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-06-20T21:07:43.000Z","updated_at":"2024-07-05T17:52:27.000Z","dependencies_parsed_at":"2024-06-28T22:29:09.213Z","dependency_job_id":"46962e19-f484-4ffb-a242-14adf0bfaecc","html_url":"https://github.com/GuiFernandess7/Biostream-genomic-data-analytics","commit_stats":null,"previous_names":["guifernandess7/biostream","guifernandess7/biostream-genetic-data-analytics","guifernandess7/biostream-genomic-data-analytics"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GuiFernandess7%2FBiostream-genomic-data-analytics","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GuiFernandess7%2FBiostream-genomic-data-analytics/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GuiFernandess7%2FBiostream-genomic-data-analytics/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GuiFernandess7%2FBiostream-genomic-data-analytics/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/GuiFernandess7","download_url":"https://codeload.github.com/GuiFernandess7/Biostream-genomic-data-analytics/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243658152,"owners_count":20326464,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["biopython","cli","python","rabbitmq","rust","streamlit"],"created_at":"2024-11-20T20:22:40.929Z","updated_at":"2026-05-10T10:17:12.997Z","avatar_url":"https://github.com/GuiFernandess7.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"## 📊 🧬 Real-time genetic data streaming\n\n\u003cimg width=\"832\" alt=\"biostream-logo\" src=\"https://github.com/GuiFernandess7/biostream-genetic-data-analytics/assets/63022500/b5514e61-e8ae-4b72-878a-b1fc33839412\"\u003e\n\nData processing, streaming and analytics (ETL) software for genetic data, including nucleotide genome sequences\n\n---\n\n### Source:\n\nNCBI Datasets Data Packages can include sequence, annotation and other data files, and metadata in one or more data report files.\nData report files are in JSON Lines format.\n\nhttps://www.ncbi.nlm.nih.gov/datasets\n\n---\n\n### Data used:\n\nOrganism Scientific Name: Dalotia coriaria\nhttps://www.ncbi.nlm.nih.gov/datasets/genome/?taxon=866043\n\n---\n\n### Preview\n\n* **Nucleotide Distribution | Near Real Time**\n\nhttps://github.com/GuiFernandess7/biostream-genomic-data-analytics/assets/63022500/cda27c2f-0dcd-4042-8aac-41acfcd29d6d\n\n---\n\n### Tools, Technologies and Modules\n\n* Rust | Cli\n* Websockets\n* Tornado\n* RabbitMQ\n* Streamlit\n* Plotly\n\n--- \n\n### Architeture:\n\n![arch-biostream](https://github.com/GuiFernandess7/biostream-genetic-data-analytics/assets/63022500/00420f32-83f5-4594-87be-07ca826a6798)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fguifernandess7%2Fbiostream-genomic-data-analytics","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fguifernandess7%2Fbiostream-genomic-data-analytics","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fguifernandess7%2Fbiostream-genomic-data-analytics/lists"}