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HiGlass VCF Track\n\n\u003e Track for viewing VCF files.\n\n[![HiGlass](https://img.shields.io/badge/higlass-👍-red.svg?colorB=0f5d92)](http://higlass.io)\n[![Build Status](https://img.shields.io/travis/higlass/higlass-pileup-track/master.svg?colorB=0f5d92)](https://travis-ci.org/higlass/higlass-pileup-track)\n\n\u003cimg src=\"/teaser.png?raw=true\" width=\"600\" /\u003e\n\n**Note**: This is the source code for the pileup only! You might want to check out the following repositories as well:\n\n- HiGlass viewer: https://github.com/higlass/higlass\n- HiGlass server: https://github.com/higlass/higlass-server\n- HiGlass docker: https://github.com/higlass/higlass-docker\n\n## Installation\n\n```\nnpm install higlass-vcf\n```\n\n## Usage\n\nThe live scripts can be found at:\n\n- https://unpkg.com/higlass-vcf@v0.1.4/dist/higlass-vcf.min.js\n\n### Client\n\n1. Make sure you load this track prior to `hglib.js`. For example:\n\n```\n\u003cscript src=\"https://unpkg.com/higlass-vcf@v0.1.4/dist/higlass-vcf.min.js\"\u003e\u003c/script\u003e\n\u003cscript src=\"hglib.js\"\u003e\u003c/script\u003e\n\u003cscript\u003e\n  ...\n\u003c/script\u003e\n```\n\n2. Now, configure the track in your view config and be happy!\n\n```\n{\n  \"editable\": true,\n  \"trackSourceServers\": [\n    \"http://higlass.io/api/v1\"\n  ],\n  \"exportViewUrl\": \"/api/v1/viewconfs\",\n  \"views\": [\n    {\n      \"initialXDomain\": [\n        0,\n        100000\n      ],\n      \"tracks\": {\n        \"top\": [\n          {\n            \"type\": \"vcf\",\n            \"height\": 180,\n            \"uid\": \"FylkvVBTSumoJ959HT4-5A\",\n            \"data\": {\n              \"type\": \"vcf\",\n              \"url\": \"https://pkerp.s3.amazonaws.com/public/HG002_SVs_Tier1_v0.6.vcf.gz\",\n              \"chromSizesUrl\": \"https://resgen.io/api/v1/chrom-sizes/?id=cNE4StljSAK9lK3amECl-A\"\n            },\n          }\n        ]\n      }\n    }\n  ]\n}\n```\n\n## Support\n\nFor questions, please either open an issue or ask on the HiGlass Slack channel at http://bit.ly/higlass-slack\n\n## Development\n\n### Installation\n\n```bash\n$ git clone https://github.com/higlass/higlass-vcf-track \u0026\u0026 higlass-vcf-track\n$ npm install\n```\n\n### Commands\n\n**Developmental server**: `npm start`\n**Production build**: `npm run build`\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhiglass%2Fhiglass-vcf","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fhiglass%2Fhiglass-vcf","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhiglass%2Fhiglass-vcf/lists"}