{"id":46282068,"url":"https://github.com/hsma-programme/decision_intelligence_atlas","last_synced_at":"2026-03-04T06:03:05.395Z","repository":{"id":322440462,"uuid":"1089130521","full_name":"hsma-programme/decision_intelligence_atlas","owner":"hsma-programme","description":"Directory of open-source tools, packages, and projects for analytics and decision science in healthcare.","archived":false,"fork":false,"pushed_at":"2025-12-10T10:01:44.000Z","size":47764,"stargazers_count":3,"open_issues_count":156,"forks_count":1,"subscribers_count":0,"default_branch":"main","last_synced_at":"2025-12-10T13:15:13.408Z","etag":null,"topics":["healthcare","healthcare-analysis","healthcare-modeling","julia","powerbi","python","r"],"latest_commit_sha":null,"homepage":"https://atlas.hsma.co.uk/","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hsma-programme.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":null,"code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2025-11-03T23:33:41.000Z","updated_at":"2025-12-10T10:00:28.000Z","dependencies_parsed_at":null,"dependency_job_id":null,"html_url":"https://github.com/hsma-programme/decision_intelligence_atlas","commit_stats":null,"previous_names":["hsma-programme/decision_intelligence_atlas"],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/hsma-programme/decision_intelligence_atlas","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hsma-programme%2Fdecision_intelligence_atlas","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hsma-programme%2Fdecision_intelligence_atlas/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hsma-programme%2Fdecision_intelligence_atlas/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hsma-programme%2Fdecision_intelligence_atlas/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hsma-programme","download_url":"https://codeload.github.com/hsma-programme/decision_intelligence_atlas/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hsma-programme%2Fdecision_intelligence_atlas/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":30073690,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-03-04T05:31:57.858Z","status":"ssl_error","status_checked_at":"2026-03-04T05:31:38.462Z","response_time":59,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["healthcare","healthcare-analysis","healthcare-modeling","julia","powerbi","python","r"],"created_at":"2026-03-04T06:03:03.842Z","updated_at":"2026-03-04T06:03:05.387Z","avatar_url":"https://github.com/hsma-programme.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"[![All Contributors](https://img.shields.io/github/all-contributors/hsma-programme/decision_intelligence_atlas?color=ee8449\u0026style=flat-square)](#contributors)\n\n**Welcome to the Healthcare Services Analytics \u0026 Decision Science Atlas. This is a directory of open-source tools, packages, and projects for analytics and decision science in healthcare.**\n\nThis site is in its very early stages - please check back as we continue to develop it.\n\nIn time, we hope this can develop into a tool to help showcase the amazing work happening across the analytics and data science communities in healthcare, promoting reuse and collaborative work on the tools we all need.\n\n## Contributors\n\n\u003c!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section --\u003e\n\u003c!-- prettier-ignore-start --\u003e\n\u003c!-- markdownlint-disable --\u003e\n\u003ctable\u003e\n  \u003ctbody\u003e\n    \u003ctr\u003e\n      \u003ctd align=\"center\" valign=\"top\" width=\"14.28%\"\u003e\u003ca href=\"https://sammirosser.com\"\u003e\u003cimg src=\"https://avatars.githubusercontent.com/u/29951987?v=4?s=100\" width=\"100px;\" alt=\"Sammi Rosser\"/\u003e\u003cbr /\u003e\u003csub\u003e\u003cb\u003eSammi Rosser\u003c/b\u003e\u003c/sub\u003e\u003c/a\u003e\u003cbr /\u003e\u003ca href=\"#code-Bergam0t\" title=\"Code\"\u003e💻\u003c/a\u003e \u003ca href=\"#content-Bergam0t\" title=\"Content\"\u003e🖋\u003c/a\u003e \u003ca href=\"#design-Bergam0t\" title=\"Design\"\u003e🎨\u003c/a\u003e \u003ca href=\"#ideas-Bergam0t\" title=\"Ideas, Planning, \u0026 Feedback\"\u003e🤔\u003c/a\u003e \u003ca href=\"#infra-Bergam0t\" title=\"Infrastructure (Hosting, Build-Tools, etc)\"\u003e🚇\u003c/a\u003e \u003ca href=\"#maintenance-Bergam0t\" title=\"Maintenance\"\u003e🚧\u003c/a\u003e \u003ca href=\"#review-Bergam0t\" title=\"Reviewed Pull Requests\"\u003e👀\u003c/a\u003e\u003c/td\u003e\n      \u003ctd align=\"center\" valign=\"top\" width=\"14.28%\"\u003e\u003ca href=\"https://www.linkedin.com/in/amyheather\"\u003e\u003cimg src=\"https://avatars.githubusercontent.com/u/92166537?v=4?s=100\" width=\"100px;\" alt=\"Amy Heather\"/\u003e\u003cbr /\u003e\u003csub\u003e\u003cb\u003eAmy Heather\u003c/b\u003e\u003c/sub\u003e\u003c/a\u003e\u003cbr /\u003e\u003ca href=\"#code-amyheather\" title=\"Code\"\u003e💻\u003c/a\u003e \u003ca href=\"#content-amyheather\" title=\"Content\"\u003e🖋\u003c/a\u003e \u003ca href=\"#doc-amyheather\" title=\"Documentation\"\u003e📖\u003c/a\u003e \u003ca href=\"#design-amyheather\" title=\"Design\"\u003e🎨\u003c/a\u003e \u003ca href=\"#maintenance-amyheather\" title=\"Maintenance\"\u003e🚧\u003c/a\u003e\u003c/td\u003e\n      \u003ctd align=\"center\" valign=\"top\" width=\"14.28%\"\u003e\u003ca href=\"http://www.personalboardroom.com\"\u003e\u003cimg src=\"https://avatars.githubusercontent.com/u/9799569?v=4?s=100\" width=\"100px;\" alt=\"Zella King\"/\u003e\u003cbr /\u003e\u003csub\u003e\u003cb\u003eZella King\u003c/b\u003e\u003c/sub\u003e\u003c/a\u003e\u003cbr /\u003e\u003ca href=\"#bug-zmek\" title=\"Bug reports\"\u003e🐛\u003c/a\u003e\u003c/td\u003e\n    \u003c/tr\u003e\n  \u003c/tbody\u003e\n\u003c/table\u003e\n\n\u003c!-- markdownlint-restore --\u003e\n\u003c!-- prettier-ignore-end --\u003e\n\n\u003c!-- ALL-CONTRIBUTORS-LIST:END --\u003e\n\n## Contributing\n\nContributions are very welcome!\n\n### Getting involved in discussions \n\nInterested in discussing some aspect of the Atlas? Got an opinion on how it should be structured, the sort of thing it should showcase, how it's laid out, or the branding? For these higher-level discussions, head over to the [discussions](https://github.com/hsma-programme/decision_intelligence_atlas/discussions) tab of our GitHub.\n\n### Raising Issues\n\nSpotted a bug? Got an idea for a potential improvement? \n\nPlease head over to our [issues](https://github.com/hsma-programme/decision_intelligence_atlas/issues) page and open a new issue - or see if you can contribute to any of the ones already open.\n\n### Contributing a tool, package or project\n\n#### via GitHub Issues (code-free approach!)\n\nIf you wish to submit a tool, package or project but are not confident with GitHub and Quarto (or you just have a simple submission to make), you can submit a GitHub issue via our template: [https://github.com/hsma-programme/decision_intelligence_atlas/issues/new/choose](https://github.com/hsma-programme/decision_intelligence_atlas/issues/new/choose)\n\nThis will collect all the required information and use it to automatically generate a new folder and file in the correct format, raising it as a 'pull request' for inclusion in the atlas. A repository administrator will then review the auto-created file, make any tweaks and fixes required, and let you know when your contribution is live.\n\n#### Advanced option: contributing a .qmd file\n\nIf you wish to have more control over your submission and are comfortable using Quarto, you may wish to **take a fork of the repository**, make your changes, and then submit a pull request. Your request will be reviewed and merged, with additions or tweaks possible.\n\nYou can find a template .qmd file for adding a package, project or tool in the `templates/` folder.\n\nTemplates for other kinds of content will follow in the future.\n\n##### Creating a new entry\n\nTo create your own entry:\n\n1. Create a folder in `packages_projects_tools/` named after your tool. Use only letters, numbers, hyphens(`-`) or underscores (`_`); no spaces or other special characters.\n    - Note that there are currently a lot of placeholders for various tools/packages/projects that @Bergam0t thinks should be added, which will just contain an empty file called `.gitkeep` that's used to tell GitHub to make the folder. You are very welcome to submit an entry for one of these! In that case, you just won't need to create a new folder - use the one that's already there.\n\n2. Copy the template `.qmd` file from the `templates/` folder into your tool folder. Rename it to match the folder name, keeping the `.qmd` extension.\n\n3. Add any additional resources (e.g., images, figs) to your folder. Use **relative links** in your `.qmd` file - for example:\n    - Good: `![](my_tool_example.png)`\n    - Bad: `![](C:/my_username/decision_intelligence_atlas/packages_projects_tools/my_tool/my_tool_example.png)`\n    - Bad: `!(my_tool/my_tool_example.png)`\n\n4. Complete the YAML header, using the provided comments for guidance.\n\n5. Write a description of the project outside the YAML header in the `.qmd` file.\n\n6. Choose categories from `templates/packages_projects_tools_permitted_categories.csv`.\n    - If no suitable category exists, add a new one in the YAML header and mention it in your pull request. An admin will review it and decide whether to add it to the list of categories.\n    * Additionally, if your entry does not fit under the existing headers on the [atlas.hsma.co.uk/packages_tools_projects](atlas.hsma.co.uk/packages_tools_projects) page, please let us know in your pull request and an admin can look at adding a new section to this page. Please let us know if you have a section heading in mind.\n\n##### Editing an existing entry\n\nYou are also welcome to suggest edits to an existing entry via a pull request. Please look in the folder `packages_projects_tools/` for a folder named after the tool you'd like to edit. This will then contain a `.qmd` file with the same name as the folder - this is where you can make edits to the tags and details.\n\nYou can look at the URL to find out the filepath you need to look for. \n\ne.g. The page for [Vidigi](https://atlas.hsma.co.uk/packages_projects_tools/vidigi/vidigi.html) has the URL `https://atlas.hsma.co.uk/packages_projects_tools/vidigi/vidigi.html`. \n\nThe file you need to edit is `packages_projects_tools/vidigi/vidigi.qmd`\n\nAdditional images or other resources can be placed in the same folder and linked to.  Use **relative links** in your `.qmd` file - for example:\n    \n- Good: `![](my_tool_example.png)`\n- Bad: `![](C:/my_username/decision_intelligence_atlas/packages_projects_tools/my_tool/my_tool_example.png)`\n- Bad: `!(my_tool/my_tool_example.png)`\n\n##### Previewing your new or edited content\n\nTo preview your entry locally, run `quarto preview` to compile and display website.  \n\nThe project currently uses Quarto version 1.7.33. \n\n\u003e [!TIP]\n\u003e You do **not** need to render the site manually other than for the purpose of checking your page renders as expected - rerendering and deployment is handled automatically by GitHub Actions when your pull request is accepted.\n\n##### Using GitHub Codespaces\n\nIf you wish to avoid having to clone the repository to your local machine and set up Quarto, you may like to try editing in GitHub codespaces. All GitHub accounts have a fairly generous free number of minutes available for codespace usage per month.\n\nTake a fork as normal using the fork button on the repository.\n\n![](assets/2025-11-12-13-49-31.png)\n\nClick on `\u003c\u003e Code`, then go to the `Codespaces` tab and select `Create codespace on main`.\n\n![](assets/2025-11-12-13-48-34.png)\n\nIt will take a few minutes, but you should then be presented with a web-based version of VSCode with the repository cloned and the appropriate version of Quarto pre-installed. You can then use the built-in GitHub features of the web-based VSCode to commit your changes to your fork and make a pull request when you are ready.\n\n### Contributing a technique or graph example\n\nTemplates for these types of contributions have not yet been set up - please check back soon!\n\nAlternatively, if you're up for the challenge of creating a template, please do feel free to raise an issue to discuss or create a pull request with your proposal.\n\n### Making other suggestions\n\nIf you have any other suggestions about the website layout, content, or anything else, please [raise an issue]() on the repository.\n\n### Getting recognition\n\nWhen your pull request is merged, you will be added to the contributors list by the pull request reviewer.\n\nReviewers: see guidance on [allcontributors.org/docs/en/bot/usage](https://allcontributors.org/docs/en/bot/usage)\n\nYou may also be added for other reasons, like providing valuable input via issues or discussions.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhsma-programme%2Fdecision_intelligence_atlas","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fhsma-programme%2Fdecision_intelligence_atlas","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhsma-programme%2Fdecision_intelligence_atlas/lists"}