{"id":20931853,"url":"https://github.com/hyperspy/emc2024_hyperspy_workshop","last_synced_at":"2026-04-01T22:05:33.685Z","repository":{"id":253775371,"uuid":"844440495","full_name":"hyperspy/EMC2024_HyperSpy_Workshop","owner":"hyperspy","description":null,"archived":false,"fork":false,"pushed_at":"2024-08-25T04:10:49.000Z","size":74108,"stargazers_count":4,"open_issues_count":0,"forks_count":5,"subscribers_count":5,"default_branch":"main","last_synced_at":"2026-03-27T15:25:29.865Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hyperspy.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-08-19T09:07:30.000Z","updated_at":"2025-11-10T09:36:03.000Z","dependencies_parsed_at":"2024-11-18T21:59:54.722Z","dependency_job_id":null,"html_url":"https://github.com/hyperspy/EMC2024_HyperSpy_Workshop","commit_stats":null,"previous_names":["hyperspy/emc2024_hyperspy_workshop"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/hyperspy/EMC2024_HyperSpy_Workshop","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hyperspy%2FEMC2024_HyperSpy_Workshop","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hyperspy%2FEMC2024_HyperSpy_Workshop/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hyperspy%2FEMC2024_HyperSpy_Workshop/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hyperspy%2FEMC2024_HyperSpy_Workshop/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hyperspy","download_url":"https://codeload.github.com/hyperspy/EMC2024_HyperSpy_Workshop/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hyperspy%2FEMC2024_HyperSpy_Workshop/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":31058996,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-03-27T19:32:53.857Z","status":"ssl_error","status_checked_at":"2026-03-27T19:32:45.136Z","response_time":164,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-18T21:46:03.355Z","updated_at":"2026-04-01T22:05:33.661Z","avatar_url":"https://github.com/hyperspy.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/hyperspy/EMC2024_HyperSpy_Workshop/HEAD)\n\n# EMC2024 HyperSpy Workshop\n\nTraining material used during the 2024 HyperSpy Workshop at the European Microscopy Congress 2024 in Copenhagen.\n\n## ✨ Try it in your browser ✨\n\n(Not working for the pyxem and eXSpy notebooks)\n\n➡️ **[https://francisco-dlp.github.io/EMC2024_HyperSpy_Workshop_jupyterlite/](https://francisco-dlp.github.io/EMC2024_HyperSpy_Workshop_jupyterlite/)**\n\n## Venue\n\nHaderup auditoriet, Panum Instituttet, Blegdamsvej 3, 2200 Kbh. N. (Careful, not CFIM, but Haderup auditoriet).\n\n## Agenda\n\nThe workshop will take place from 9:00 to 17:00 CEST on Sunday the 25th of September.\n\n| Time         | Activity                                                                   | Presenter              |\n|--------------|----------------------------------------------------------------------------|------------------------|\n| 8:30-9:00    | Welcome coffee/tea                                                         |                        |\n| 9:00-9:15    | Introduction talk                                                          | Francisco de la Peña   |\n| 9:15-10:30   | 1. Getting started                                                         | Magnus Nord            |\n| 10:30-10:45  | Coffee break                                                               |                        |\n| 10:45-11:30  | 2. Decomposition and BSS                                                   | Francisco de la Peña   |\n| 11:30-12:15  | 3. Curve fitting                                                           | Francisco de la Peña   |\n| 12:15-13:00  | 4. EDX with [eXSpy](https://hyperspy.org/exspy/)                           | Katherine MacArthur    |\n| 13:00-13:45  | Lunch break                                                                |                        |\n| 13:45-14:30  | 5. EELS with [eXSpy](https://hyperspy.org/exspy/)                          | Francisco de la Peña   |\n| 14:30-15:15  | 6. Cathodoluminescence with [LumiSpy](https://docs.lumispy.org)            | Gunnar Kusch           |\n| 15:15-15:30  | Coffee break                                                               |                        |\n| 15:30-16:15  | 7. Lazy signals for Big Data                                               | Magnus Nord            |\n| 16:15-17:00  | 8. 4D-STEM with [Pyxem](https://pyxem.readthedocs.io/en/stable/index.html) | Magnus Nord            |\n\nThe numbered activities correspond to the tutorials in the folders of this repository.\n\n## Instructors\n\n- Francisco de la Peña (University of Lille)\n- Gunnar Kusch (University of Cambridge)\n- Håkon Wiik Ånes (xnovotech)\n- Hedda Christine Soland (Lund University)\n- Katherine MacArthur (Oxford Instruments)\n- Kristian Tveitstol (NTNU)\n- Magnus Nord (NTNU)\n- Sivert J.V. Dagenborg (NTNU)\n\n## Downloading large files\n\nDownload the zip-file from this link: https://filesender.sikt.no/?s=download\u0026token=000ee6a7-008e-4a63-aada-67706ef762bc\n\n## Software installation\n\nTo use the Jupyter Notebooks in this repository, you need to install some software packages first. It installation instructions for beginners and advanced users can be found below.\n\n\n### Simple installation instructions (best for Python beginners)\n\nThe easiest way to install all the software required to run the Jupyter Notebooks in this repository is to [install the HyperSpy Bundle](https://hyperspy.org/hyperspy-bundle/install.html) that you can download from [here](https://github.com/hyperspy/hyperspy-bundle/releases/latest).\n\n\n### Advanced installation instructions (for advanced users)\n\nIf you prefer to customize your installation, we suggest installing a conda distribution (we suggest [MiniForge](https://github.com/conda-forge/miniforge)) and install all the required Python packages in a dedicated environment executing the following commands in a terminal (the conda prompt in Windows):\n\n\n```bash\nconda install nb_conda_kernels jupyterlab start_jupyter_cm ipympl -c conda-forge\nconda create -n hyperspy_EMC2024 python=3.11 hyperspy pyxem ipympl exspy lumispy ipykernel -c conda-forge\n```\n\nTo add Jupyter to the context menu of your file browser execute the following command:\n\n```bash\nstart_jupyter_cm\n```\n\nTo use HyperSpy in JupyterLab, start Jupyter Lab and choose the `Python [conda env:hyperspy_EMC2024]` kernel. Alternatively, start JupyterLab from the `hyperspy_EMC2024` environment as follows:\n\n```bash\nconda activate hyperspy_EMC2024\njupyter lab\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhyperspy%2Femc2024_hyperspy_workshop","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fhyperspy%2Femc2024_hyperspy_workshop","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fhyperspy%2Femc2024_hyperspy_workshop/lists"}