{"id":26450401,"url":"https://github.com/ibchgenomic/machine-learning-expression-sequence","last_synced_at":"2025-06-29T13:04:36.303Z","repository":{"id":262142666,"uuid":"846225695","full_name":"IBCHgenomic/machine-learning-expression-sequence","owner":"IBCHgenomic","description":"sequence and expression based machine learning","archived":false,"fork":false,"pushed_at":"2024-08-22T20:04:55.000Z","size":4,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-06-29T13:04:35.370Z","etag":null,"topics":["bioinformatics","expression-analysis","genome-analysis","genome-features","genome-informatics","machine-learning","machinelearning","sequence-features"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/IBCHgenomic.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-08-22T19:15:22.000Z","updated_at":"2025-01-16T18:45:32.000Z","dependencies_parsed_at":"2024-11-10T20:18:25.385Z","dependency_job_id":null,"html_url":"https://github.com/IBCHgenomic/machine-learning-expression-sequence","commit_stats":null,"previous_names":["applicativesystem/ml-expression-sequence","sciencegenome/python-machine-learning-expression-sequence","sciencegenome/machine-learning-expression-sequence","ibchgenomic/machine-learning-expression-sequence"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/IBCHgenomic/machine-learning-expression-sequence","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Fmachine-learning-expression-sequence","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Fmachine-learning-expression-sequence/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Fmachine-learning-expression-sequence/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Fmachine-learning-expression-sequence/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/IBCHgenomic","download_url":"https://codeload.github.com/IBCHgenomic/machine-learning-expression-sequence/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Fmachine-learning-expression-sequence/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":262598167,"owners_count":23334669,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","expression-analysis","genome-analysis","genome-features","genome-informatics","machine-learning","machinelearning","sequence-features"],"created_at":"2025-03-18T15:25:46.904Z","updated_at":"2025-06-29T13:04:36.266Z","avatar_url":"https://github.com/IBCHgenomic.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# expression-sequence-ml\n\n- a automated framework for the sequence to expression machine learning.\n- it takes the fasta sequences, expression  file from the expression analysis and then writes the pickle file: a automated framework for the sequence to expression machine learning.\n- it takes the fasta sequences, expression file from the expression analysis and then writes the pickle file for the automated machine learning.\n- It goes through all the classifier and gives you all the classifier and you can select the one based on the precision and accuracy call.\n- It writes pickle file with the highest protocol. since machine learning algorithms dont allow for the item assignment so i have put all the iterations as pickle file, you can remove the string variable and run them.\n\nGaurav Sablok \\\nUniversity of Potsdam \\\nPotsdam,Germany\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fibchgenomic%2Fmachine-learning-expression-sequence","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fibchgenomic%2Fmachine-learning-expression-sequence","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fibchgenomic%2Fmachine-learning-expression-sequence/lists"}