{"id":26450383,"url":"https://github.com/ibchgenomic/readanalyzer","last_synced_at":"2025-07-06T06:41:00.282Z","repository":{"id":263865489,"uuid":"891631692","full_name":"IBCHgenomic/readanalyzer","owner":"IBCHgenomic","description":"readanalyzer for miseq, nextseq, novase and longreads","archived":false,"fork":false,"pushed_at":"2025-02-25T19:11:24.000Z","size":3330,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-11T23:15:36.517Z","etag":null,"topics":["bioinformatics","genome-analysis","genome-sequencing","illumina-sequencing","sequence-classification","sequencing-data"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/IBCHgenomic.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-11-20T17:12:41.000Z","updated_at":"2025-02-25T19:11:27.000Z","dependencies_parsed_at":"2025-01-14T22:27:33.995Z","dependency_job_id":"32b38830-0e6a-46dc-8dcc-47e3255634ef","html_url":"https://github.com/IBCHgenomic/readanalyzer","commit_stats":null,"previous_names":["applicativesystem/rust-fastp-clip","sciencegenome/rust-fastp-clip","sciencegenome/fastp-clip","sciencegenome/readanalyzer","ibchgenomic/readanalyzer"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Freadanalyzer","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Freadanalyzer/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Freadanalyzer/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IBCHgenomic%2Freadanalyzer/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/IBCHgenomic","download_url":"https://codeload.github.com/IBCHgenomic/readanalyzer/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":244247462,"owners_count":20422613,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","genome-analysis","genome-sequencing","illumina-sequencing","sequence-classification","sequencing-data"],"created_at":"2025-03-18T15:25:24.600Z","updated_at":"2025-03-18T15:25:25.275Z","avatar_url":"https://github.com/IBCHgenomic.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# readanalyzer\n\n - rust readanalyzer\n - provide the reads in the fastq from novaseq, nextseq and clip the regions according to your choice.\n - please see the last commit message and if it says compiled binary then it is completed or else still in development version.\n \n ```\n cargo build\n ```\n ```\n\n ```\n readanalyzer: analyze reads from illumina and long reads\n\n Usage: readanalyzer \u003cCOMMAND\u003e\n\n Commands:\n  clip-fastq       clipping specific regions\n  quality-clip     drop specific quality\n  drop-quality     drop specific score\n  adapter-clipper  remove the quality and the adapter\n  sync\n  help             Print this message or the help of the given subcommand(s)\n\n Options:\n  -h, --help     Print help\n  -V, --version  Print version\n\n```\n\n Gaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fibchgenomic%2Freadanalyzer","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fibchgenomic%2Freadanalyzer","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fibchgenomic%2Freadanalyzer/lists"}