{"id":34703948,"url":"https://github.com/icaoberg/singularity-r-base-biocmanager","last_synced_at":"2026-05-27T19:31:54.012Z","repository":{"id":146198894,"uuid":"222802182","full_name":"icaoberg/singularity-r-base-biocmanager","owner":"icaoberg","description":"Singularity recipe for r-base + BiocManager","archived":false,"fork":false,"pushed_at":"2019-11-19T22:41:31.000Z","size":2,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"master","last_synced_at":"2023-10-20T20:18:35.217Z","etag":null,"topics":["singularity","singularity-container"],"latest_commit_sha":null,"homepage":"http://www.andrew.cmu.edu/~icaoberg","language":"Shell","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/icaoberg.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2019-11-19T22:29:22.000Z","updated_at":"2023-10-20T20:18:35.599Z","dependencies_parsed_at":null,"dependency_job_id":"7b789638-d209-4d92-9566-824131c167e0","html_url":"https://github.com/icaoberg/singularity-r-base-biocmanager","commit_stats":null,"previous_names":[],"tags_count":0,"template":null,"template_full_name":null,"purl":"pkg:github/icaoberg/singularity-r-base-biocmanager","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/icaoberg%2Fsingularity-r-base-biocmanager","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/icaoberg%2Fsingularity-r-base-biocmanager/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/icaoberg%2Fsingularity-r-base-biocmanager/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/icaoberg%2Fsingularity-r-base-biocmanager/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/icaoberg","download_url":"https://codeload.github.com/icaoberg/singularity-r-base-biocmanager/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/icaoberg%2Fsingularity-r-base-biocmanager/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":33581550,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-05-26T15:22:16.424Z","status":"online","status_checked_at":"2026-05-27T02:00:06.184Z","response_time":53,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["singularity","singularity-container"],"created_at":"2025-12-24T22:57:54.320Z","updated_at":"2026-05-27T19:31:54.002Z","avatar_url":"https://github.com/icaoberg.png","language":"Shell","funding_links":["https://www.buymeacoffee.com/icaoberg"],"categories":[],"sub_categories":[],"readme":"# README\n![Release](https://img.shields.io/badge/release-prealpha-red.svg)\n[![GitHub issues](https://img.shields.io/github/issues/icaoberg/singularity-r-base-biocmanager.svg)](https://github.com/icaoberg/singularity-r-base-biocmanager/issues)\n[![GitHub forks](https://img.shields.io/github/forks/icaoberg/singularity-r-base-biocmanager.svg)](https://github.com/icaoberg/singularity-r-base-biocmanager/network)\n[![GitHub stars](https://img.shields.io/github/stars/icaoberg/singularity-r-base-biocmanager.svg)](https://github.com/icaoberg/singularity-r-base-biocmanager/stargazers)\n[![GitHub license](https://img.shields.io/badge/license-GPLv3-blue.svg)](https://www.gnu.org/licenses/quick-guide-gplv3.en.html)\n\nThis is the Singularity recipe to build an OpenSUSE 4.2 image with R v3.6.1 + BiocManager.\n\n##  Building image\nTo build the image run\n\n```\nbash ./script.sh\n```\n\n## Requirements\nSingularity v2.6+ is needed to build the container. However as of today, only version 2.6.0 will work on our department cluster.\n\n## Disclaimer\n\n[![Wold you buy me some coffee?](https://www.buymeacoffee.com/assets/img/custom_images/orange_img.png)](https://www.buymeacoffee.com/icaoberg)\n\nI am nothing but a humble programmer creating the container for these wonderful apps.\n\n---\n[![CBD](http://www.cbd.cmu.edu/wp-content/uploads/2017/07/wordpress-default.png)](http://www.cbd.cmu.edu)\n\nCopyleft © 2018-2019 [icaoberg](http://www.andrew.cmu.edu/~icaoberg) at the [Computational Biology Department](http://www.cbd.cmu.edu) in [Carnegie Mellon University](http://www.cmu.edu)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ficaoberg%2Fsingularity-r-base-biocmanager","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ficaoberg%2Fsingularity-r-base-biocmanager","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ficaoberg%2Fsingularity-r-base-biocmanager/lists"}