{"id":17655170,"url":"https://github.com/ickc/so-software-environment","last_synced_at":"2025-04-28T12:09:27.893Z","repository":{"id":185054837,"uuid":"672934700","full_name":"ickc/so-software-environment","owner":"ickc","description":"scripts and documentation on bootstrapping a SO software environment in SO:UK.","archived":true,"fork":false,"pushed_at":"2024-12-28T02:13:12.000Z","size":54,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-04-28T12:08:43.998Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Shell","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ickc.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-07-31T13:49:35.000Z","updated_at":"2024-12-28T04:24:26.000Z","dependencies_parsed_at":"2023-11-22T01:00:27.146Z","dependency_job_id":"b3e6131f-5f16-4b3c-a1ef-1d05c85379c3","html_url":"https://github.com/ickc/so-software-environment","commit_stats":null,"previous_names":["simonsobs-uk/so-software-environment","ickc/so-software-environment"],"tags_count":333,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ickc%2Fso-software-environment","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ickc%2Fso-software-environment/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ickc%2Fso-software-environment/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ickc%2Fso-software-environment/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ickc","download_url":"https://codeload.github.com/ickc/so-software-environment/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":251311331,"owners_count":21569009,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-10-23T12:41:17.574Z","updated_at":"2025-04-28T12:09:27.873Z","avatar_url":"https://github.com/ickc.png","language":"Shell","funding_links":[],"categories":[],"sub_categories":[],"readme":"# so-software-environment\n\nscripts and documentation on bootstrapping a SO software environment in SO:UK.\n\n# Creating SO software stack using conda\n\nThis is the recommended method if you are developing on your machine. For `simons1`, `soukdev1`, Blackett, SDSC, or NERSC, see relevant sections in SO wiki or talk to respective people in loading maintained SO software environments.\n\n1. install conda/mamba first\n\n2. install SO environment: before you begin, you may want to edit `examples/so.yml` manually if you want to choose a different version of `toast` or `sotodlib` for example.\n\n    - create new environment:\n\n        - using conda:\n\n            ```sh\n            # you may need to activate the base environment first if you haven't done so.\n            conda activate\n            # or\n            . activate\n            # then\n            conda env create -f examples/so.yml\n            conda activate so-310\n            python -m ipykernel install --user --name so-310 --display-name so-310\n            ```\n\n        - using mamba:\n\n            ```sh\n            # you may need to activate the base environment first if you haven't done so.\n            conda activate\n            # or\n            . activate\n            # then\n            mamba env create -f examples/so.yml\n            conda activate so-310\n            python -m ipykernel install --user --name so-310 --display-name so-310\n            ```\n\n    - update existing environment:\n\n        - using conda: `conda env update --name so-310 --file examples/so.yml --prune`\n\n        - using mamba: `mamba env update --name so-310 --file examples/so.yml --prune`\n\n3. (optional) install \u0026 development: here we use `sotodlib` as an example:\n\n    ```sh\n    # go to some directory that you want to put the git repo first\n    git clone git@github.com:simonsobs/sotodlib.git\n    # change branch or tag if you need\n    # pip install -e .\n    ```\n\n4. running TOAST test to ensure your installation works:\n\n    ```sh\n    python -c 'import toast.tests; toast.tests.run()'\n    ```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fickc%2Fso-software-environment","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fickc%2Fso-software-environment","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fickc%2Fso-software-environment/lists"}