{"id":28481551,"url":"https://github.com/insightsoftwareconsortium/simpleitktutorialmiccai2015","last_synced_at":"2025-07-29T01:04:47.795Z","repository":{"id":62203702,"uuid":"43108610","full_name":"InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015","owner":"InsightSoftwareConsortium","description":"SimpleITK tutorial at the 2015 MICCAI conference ","archived":false,"fork":false,"pushed_at":"2015-10-14T17:20:09.000Z","size":5757,"stargazers_count":23,"open_issues_count":2,"forks_count":17,"subscribers_count":30,"default_branch":"master","last_synced_at":"2025-07-27T08:35:49.525Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://www.itk.org/Wiki/SimpleITK/Tutorials/MICCAI2015","language":"Python","has_issues":false,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/InsightSoftwareConsortium.png","metadata":{"files":{"readme":"README.rst","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2015-09-25T03:55:00.000Z","updated_at":"2024-10-26T14:57:07.000Z","dependencies_parsed_at":"2022-10-28T11:00:42.145Z","dependency_job_id":null,"html_url":"https://github.com/InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/InsightSoftwareConsortium%2FSimpleITKTutorialMICCAI2015","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/InsightSoftwareConsortium%2FSimpleITKTutorialMICCAI2015/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/InsightSoftwareConsortium%2FSimpleITKTutorialMICCAI2015/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/InsightSoftwareConsortium%2FSimpleITKTutorialMICCAI2015/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/InsightSoftwareConsortium","download_url":"https://codeload.github.com/InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/InsightSoftwareConsortium%2FSimpleITKTutorialMICCAI2015/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":267612778,"owners_count":24115522,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-07-28T02:00:09.689Z","response_time":68,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-06-07T20:07:40.868Z","updated_at":"2025-07-29T01:04:47.788Z","avatar_url":"https://github.com/InsightSoftwareConsortium.png","language":"Python","readme":"|Circle CI|\n\n.. |Circle CI| image:: https://circleci.com/gh/InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015.svg?style=svg\n   :target: https://circleci.com/gh/InsightSoftwareConsortium/SimpleITKTutorialMICCAI2015\n\nMICCAI 2015: An Interactive, Python-based Introduction to Registration with the Insight Toolkit (ITK)\n=====================================================================================================\n\n\nOrganizers\n----------\n\n.. image:: http://www.itk.org/Wiki/images/thumb/b/b9/Nlm.jpg/60px-Nlm.jpg\n   :alt: National Library of Medicine\n.. image:: http://www.itk.org/Wiki/images/thumb/0/07/Kitware.jpg/150px-Kitware.jpg\n   :alt: Kitware Inc.\n.. image:: http://www.itk.org/Wiki/images/1/1e/Upenn.jpg\n   :alt: University of Pennsylvania\n.. image:: http://www.itk.org/Wiki/images/4/43/Uofiowa.jpg \n   :alt: University of Iowa\n.. image:: http://www.itk.org/Wiki/images/9/91/Uva.jpg\n   :alt: University of Virginia\n|\n- Brian Avants, University of Pennsylvania\n- Hans Johnson, University of Iowa\n- Bradley Lowekamp, Medical Science \u0026 Computing and National Institutes of Health\n- Matthew McCormick, Kitware Inc\n- Nick Tustison, University of Virginia\n- Ziv Yaniv, TAJ Technologies Inc. and National Institutes of Health\n\n\nWho Should Attend\n-----------------\n\n-  Do you want your students to gain practical experience with\n   registration while minimizing their programming load?\n-  Do you want to easily experiment with various ITK registration\n   configurations, or optimize the settings of a specific registration\n   configuration?\n\nIf you answered yes to either of these questions, then this tutorial is\nfor you.\n\nThe goal of this half-day tutorial is to introduce students and\nresearchers to SimpleITK’s interface for the ITK version 4 registration\nframework. SimpleITK is, as the name suggests, a simpler interface to\nITK. It provides a procedural interface and bindings to several\ninterpreted languages, facilitating fast experimentation with ITK\nalgorithms. In this tutorial we will use the Python programming language\nand the IPython Notebook interactive environment to explore the various\nfeatures of the ITKv4 registration framework. Key features presented\ninclude: uniform treatment of linear, deformable and composite\ntransformations, embedded multi-resolution registration and self\ncalibrating optimizers. Using a hands on approach, participants will\nexperiment with various registration tasks, learning how to use\nSimpleITK.\n\nProgram\n-------\n\n1. *08:30am:* `Setup and\n   introduction \u003c1_Setup_and_introduction.ipynb\u003e`__ *Matthew McCormick\n   and Hans Johnson*\n2. *09:00am:* `SimpleITK basics \u003c2_SimpleITK_basics.ipynb\u003e`__: loading\n   data, image access, image transformations, image resampling, basic\n   filters *Matthew McCormick*\n3. *10:00am:* The ITKv4 registration framework *Nick\n   Tustison and Brian Avants*\n4. *10:30am:* Coffee break.\n5. *10:45am:* `Registration 1 \u003c3_Registration_1.ipynb\u003e`__: composite\n   transform, transformation initialization, embedded multi-resolution,\n   scale parameter estimation, optimization termination criteria *Ziv\n   Yaniv*\n6. *11:30am:* `Registration 2 \u003c4_Registration_2.ipynb\u003e`__: nonrigid\n   registration, Bspline and displacement field transformations *Ziv\n   Yaniv*\n7. *12:30pm:* Lunch.\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Finsightsoftwareconsortium%2Fsimpleitktutorialmiccai2015","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Finsightsoftwareconsortium%2Fsimpleitktutorialmiccai2015","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Finsightsoftwareconsortium%2Fsimpleitktutorialmiccai2015/lists"}