{"id":20930734,"url":"https://github.com/intermine/ci-scripts","last_synced_at":"2025-03-13T02:14:16.176Z","repository":{"id":136990282,"uuid":"189005735","full_name":"intermine/ci-scripts","owner":"intermine","description":"common intermine testmine install scripts used in multiple repos.","archived":false,"fork":false,"pushed_at":"2021-01-11T11:36:19.000Z","size":15735,"stargazers_count":0,"open_issues_count":0,"forks_count":3,"subscribers_count":6,"default_branch":"master","last_synced_at":"2025-01-19T18:52:45.221Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Shell","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"lgpl-2.1","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/intermine.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-05-28T10:20:51.000Z","updated_at":"2021-01-11T11:36:22.000Z","dependencies_parsed_at":null,"dependency_job_id":"ca87bf7a-5846-4a6a-a703-545edcd1bc93","html_url":"https://github.com/intermine/ci-scripts","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/intermine%2Fci-scripts","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/intermine%2Fci-scripts/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/intermine%2Fci-scripts/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/intermine%2Fci-scripts/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/intermine","download_url":"https://codeload.github.com/intermine/ci-scripts/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243324506,"owners_count":20273113,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-18T21:36:07.583Z","updated_at":"2025-03-13T02:14:16.154Z","avatar_url":"https://github.com/intermine.png","language":"Shell","funding_links":[],"categories":[],"sub_categories":[],"readme":"## Warning: Not in use\n\nThese scripts have been superseded by [intermine_boot](https://github.com/intermine/intermine_boot). This repository is no longer being maintained.\n\n# ci-scripts\n\n[![Build Status](https://travis-ci.org/intermine/ci-scripts.svg?branch=master)](https://travis-ci.org/intermine/ci-scripts)\n\nShell scripts for setting up InterMine instances as part of CI.\n\n**Requirements**\n- postgresql\n- openjdk8 (9 and above won't work)\n\nTo run as part of CI from another repo:\n\n```\ngit clone https://github.com/intermine/ci-scripts\n(cd ci-scripts \u0026\u0026 bash init-biotestmine.sh)\n```\n\nAs part of a Travis pipeline:\n\n```yml\nlanguage: java\nsudo: true\njdk:\n  - openjdk8\nservices:\n  - postgresql\n\nbefore_install:\n    - git clone https://github.com/intermine/ci-scripts\n    - (cd ci-scripts \u0026\u0026 bash init-biotestmine.sh)\n```\n\nIf you wish to use the lighter *testmodel*, replace `init-biotestmine.sh` with `init-testmine.sh`.\n\n## Build biotestmine dataset from scratch\n\nThe `init-biotestmine.sh` script will by default restore the integrated data from a pre-built database dump. If you wish to build the dataset from scratch instead, you can specify `BUILD_DATASET=true` when invoking the script. Note that this will usually take upwards of 10 minutes.\n\n## Full processing of biotestmine dataset\n\nThe `init-biotestmine.sh` script uses a stripped down `project.xml` for processing the dataset. If you miss any features, you can specify `NO_CONFIG_OVERRIDE=true` when invoking the script to use the complete (albeit heavier) `project.xml` in the [biotestmine repository](https://github.com/intermine/biotestmine/blob/master/data/project.xml).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fintermine%2Fci-scripts","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fintermine%2Fci-scripts","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fintermine%2Fci-scripts/lists"}