{"id":18963864,"url":"https://github.com/janeliascicomp/hortacloud","last_synced_at":"2025-04-19T12:46:33.857Z","repository":{"id":40349902,"uuid":"428847631","full_name":"JaneliaSciComp/hortacloud","owner":"JaneliaSciComp","description":"HortaCloud - 3D annotation platform for large microscopy data","archived":false,"fork":false,"pushed_at":"2025-03-28T16:12:24.000Z","size":24140,"stargazers_count":10,"open_issues_count":47,"forks_count":1,"subscribers_count":10,"default_branch":"main","last_synced_at":"2025-04-16T05:44:34.125Z","etag":null,"topics":["annotation-tool","aws","janelia","neurons","neuroscience","scientific-computing"],"latest_commit_sha":null,"homepage":"","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/JaneliaSciComp.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.txt","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-11-16T23:37:59.000Z","updated_at":"2025-03-28T16:12:10.000Z","dependencies_parsed_at":"2024-08-27T19:03:36.546Z","dependency_job_id":"a77e362c-02d4-4359-82a0-ad84f4ae2e2b","html_url":"https://github.com/JaneliaSciComp/hortacloud","commit_stats":null,"previous_names":[],"tags_count":15,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2Fhortacloud","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2Fhortacloud/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2Fhortacloud/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2Fhortacloud/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/JaneliaSciComp","download_url":"https://codeload.github.com/JaneliaSciComp/hortacloud/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":249698228,"owners_count":21312168,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["annotation-tool","aws","janelia","neurons","neuroscience","scientific-computing"],"created_at":"2024-11-08T14:22:08.149Z","updated_at":"2025-04-19T12:46:33.826Z","avatar_url":"https://github.com/JaneliaSciComp.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"![HortaCloud](https://github.com/user-attachments/assets/aff478aa-94c6-477e-a726-7e764888a467)\n\n[![DOI](https://zenodo.org/badge/428847631.svg)](https://zenodo.org/badge/latestdoi/428847631)\n\nHortaCloud is a streaming 3D annotation platform for large microscopy data that runs entirely in the cloud. It is based on the [Janelia Workstation](https://github.com/JaneliaSciComp/workstation) software and was originally developed in support of the [MouseLight Team Project](https://www.janelia.org/project-team/mouselight).\n\nIt combines state-of-the-art volumetric visualization, advanced features for 3D neuronal annotation, and real-time multi-user collaboration with a set of enterprise-grade backend microservices for moving and processing large amounts of data rapidly and securely. HortaCloud takes advantage of cloud-based Virtual Desktop Infrastructure (VDI) to perform all 3D rendering in cloud-leased GPUs which are data-adjacent, and only transfer a high-fidelity interactive video stream to each annotator’s local compute platform through a web browser.\n\n![System architecture diagram](docs/images/system_architecture_800.png)\n\nMore information is available on the [HortaCloud website](https://hortacloud.janelia.org).\n\n## Deployment\n\n[See the documentation](https://hortacloud.janelia.org/docs/administration/aws/) to learn how to deploy this system to your AWS account.\n\n## Contributing\n\nRead about [how to contribute](CONTRIBUTING.md) to this project.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjaneliascicomp%2Fhortacloud","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fjaneliascicomp%2Fhortacloud","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjaneliascicomp%2Fhortacloud/lists"}