{"id":18963862,"url":"https://github.com/janeliascicomp/pywavesurfer","last_synced_at":"2025-04-19T12:41:18.115Z","repository":{"id":25903496,"uuid":"106594055","full_name":"JaneliaSciComp/PyWaveSurfer","owner":"JaneliaSciComp","description":"PyWaveSurfer is a Python package for reading WaveSurfer data files in Python.","archived":false,"fork":false,"pushed_at":"2024-12-08T18:04:36.000Z","size":360,"stargazers_count":9,"open_issues_count":8,"forks_count":6,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-03-29T07:51:29.419Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/JaneliaSciComp.png","metadata":{"files":{"readme":"README.rst","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2017-10-11T18:34:39.000Z","updated_at":"2024-05-27T22:49:30.000Z","dependencies_parsed_at":"2023-02-13T00:01:23.578Z","dependency_job_id":"564fa376-f605-4b40-8893-0ee069023093","html_url":"https://github.com/JaneliaSciComp/PyWaveSurfer","commit_stats":{"total_commits":157,"total_committers":7,"mean_commits":"22.428571428571427","dds":0.4840764331210191,"last_synced_commit":"68b5742d11105772b0166c8a1d4a83dd4eeff777"},"previous_names":[],"tags_count":3,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2FPyWaveSurfer","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2FPyWaveSurfer/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2FPyWaveSurfer/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JaneliaSciComp%2FPyWaveSurfer/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/JaneliaSciComp","download_url":"https://codeload.github.com/JaneliaSciComp/PyWaveSurfer/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":249201117,"owners_count":21229004,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-08T14:22:05.053Z","updated_at":"2025-04-16T05:31:28.892Z","avatar_url":"https://github.com/JaneliaSciComp.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"PyWaveSurfer\n============\n\n\n|Build Status| |PyPI version| |Updates| |Cover|\n\n\nPyWaveSurfer is a Python package for reading data acquired using WaveSurfer.\n\n\nSee the `official site \u003chttp://wavesurfer.janelia.org/\u003e`_ for more information about WaveSurfer.\n\n\nExample usage\n-------------\n\n.. code-block:: python\n\n    from pywavesurfer import ws\n    # to get analog channels scaled in float64 :\n    data_as_dict = ws.loadDataFile(filename='path/to/file.h5', format_string='double' )\n    # to get analog channels scaled in float32:\n    data_as_dict = ws.loadDataFile(filename='path/to/file.h5', format_string='single' )\n    # to get the raw analog channels in int16:\n    data_as_dict = ws.loadDataFile(filename='path/to/file.h5', format_string='raw' )\n\n\nDescription of the content can be found in the documentation\n`here \u003chttps://wavesurfer.janelia.org/manual-0.945/index.html#reading-acquired-data\u003e`_.\n\nCopyright\n---------\n\nExcept where noted, all code, documentation, images, and anything else\nin PyWaveSurfer is copyright 2017 by the Howard Hughes Medical \nInstitute.\n\n\nLicense\n-------\n\nRedistribution and use in source and binary forms, with or without\nmodification, are permitted provided that the following conditions are\nmet:\n\n* Redistributions of source code must retain the above copyright\n  notice, this list of conditions and the following disclaimer.\n\n* Redistributions in binary form must reproduce the above copyright\n  notice, this list of conditions and the following disclaimer in the\n  documentation and/or other materials provided with the distribution.\n\n* Neither the name of HHMI nor the names of its contributors may be\n  used to endorse or promote products derived from this software\n  without specific prior written permission.\n\nTHIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS\n\"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT\nLIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR\nA PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT\nOWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,\nSPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT\nLIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,\nDATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY\nTHEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT\n(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE\nOF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.\n\n\nAuthors\n-------\n\nPyWaveSurfer was developed at the HHMI Janelia Research Campus, by \nAdam L. Taylor and Boaz Mohar.\n\n\nMaintainers\n-----------\n\nAdam L. Taylor \nScientific Computing\nHHMI Janelia Research Campus\n\n\nVersion History\n---------------\n\n0.0.1    Oct 11, 2017    Initial release.\n\n0.0.2    Oct 14, 2017    Added a check for WS version.\n\n0.0.3    Aug 23, 2018    Added test for WS 0.97 data files, changed an exception to a warning, updated dependencies.\n\n0.0.5    Oct 22, 2020  \n\n0.0.6    Oct 14, 2021 Updated dependencies, drop python 3.6, added 3.9. Moved CI/CD to Github Actions.\n\n0.0.7    Oct 14, 2021 Updated dependencies, added context manager to h5py open.\n\n0.0.8    Sep 19, 2022 Updated dependencies, drop python 3.7, added 3.10.\n\n0.0.9    Jan 23, 2023 Updated dependencies.\n\n.. |Updates| image:: https://pyup.io/repos/github/JaneliaSciComp/PyWaveSurfer/shield.svg\n   :target: https://pyup.io/repos/github/JaneliaSciComp/PyWaveSurfer/\n.. |Build Status| image:: https://github.com/JaneliaSciComp/PyWaveSurfer/actions/workflows/main.yml/badge.svg\n   :target: https://github.com/JaneliaSciComp/PyWaveSurfer/actions/workflows/main.yml\n.. |PyPI version| image:: https://badge.fury.io/py/pywavesurfer.svg\n   :target: https://badge.fury.io/py/pywavesurfer\n.. |Cover| image:: https://coveralls.io/repos/github/JaneliaSciComp/PyWaveSurfer/badge.svg?branch=master\n   :target: https://coveralls.io/github/JaneliaSciComp/PyWaveSurfer?branch=master\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjaneliascicomp%2Fpywavesurfer","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fjaneliascicomp%2Fpywavesurfer","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjaneliascicomp%2Fpywavesurfer/lists"}