{"id":21247706,"url":"https://github.com/jasterv/sarscov-hierarchy","last_synced_at":"2025-10-19T03:53:47.798Z","repository":{"id":89918438,"uuid":"257944109","full_name":"JasterV/SARSCOV-HIERARCHY","owner":"JasterV","description":"      The goal of this project is to read and analize RNA sequences of the Sars-Covid-2 virus around the world and build a hierarchy tree by implementing a hierarchical clustering 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Welcome to the Sarscov Hierarchy Project 👋\n[![All Contributors](https://img.shields.io/badge/all_contributors-2-orange.svg?style=flat-square)](#-contributors-)\n\u003cimg src=\"https://img.shields.io/badge/version-1.0-blue.svg?cacheSeconds=2592000\" /\u003e\n\n\n\u003e The goal of this project is to read and analize RNA sequences of the Sars-Covid-2 virus around the world and build a hierarchy tree implementing a hierarchical clustering algorithm\n\n### 🏠 [Homepage](https://github.com/JasterV/COVID-19-CHALLENGE)\n\n### Install Dependencies \n\n``` \npip install -r requeriments.txt 📝\n```\n\n### ✨ Execute\n\nYou must install the sequences.fasta and sequences.csv files from the [NCBI official database](https://www.ncbi.nlm.nih.gov/labs/virus/vssi/#/virus?VirusLineage_ss=Severe%20acute%20respiratory%20syndrome%20coronavirus%202%20(SARS-CoV-2),%20taxid:2697049\u0026SeqType_s=Nucleotide) to execute this project.\n\nWe provide you a .zip file with 2 other fasta and csv files to try out without downloading anything so, have fun!\n\n\n```\npython src/main/sarscovhierarchy.py \u003cdata_path\u003e\n```\n\n### Full Code Documentation\n\n[Python Code Documentation](https://manudiv16.github.io/Covid-19-challenge)\n\n[Rust Code Documentation](https://jasterv.github.io/rust-covid-docs/)\n\n## 👤 Contributors ✨\n\n\u003ctable\u003e\n  \u003ctr\u003e    \n    \u003ctd align=\"center\"\u003e\u003ca href=\"https://github.com/manudiv16\"\u003e\u003cimg src=\"https://avatars3.githubusercontent.com/u/38869988?v=4\" width=\"100px;\" alt=\"\"/\u003e\u003cbr /\u003e\u003csub\u003e\u003cb\u003eManu Martin\u003c/b\u003e\u003c/sub\u003e\u003c/a\u003e\u003cbr /\u003e\u003ca href=\"https://github.com/JasterV/COVID-19-CHALLENGE/commits?author=manudiv16\" title=\"Code\"\u003e💻\u003c/a\u003e\u003c/td\u003e\n    \u003ctd align=\"center\"\u003e\u003ca href=\"https://github.com/JasterV\"\u003e\u003cimg src=\"https://avatars3.githubusercontent.com/u/49537445?v=4\" width=\"100px;\" alt=\"\"/\u003e\u003cbr /\u003e\u003csub\u003e\u003cb\u003eVictor Martínez\u003c/b\u003e\u003c/sub\u003e\u003c/a\u003e\u003cbr /\u003e\u003ca href=\"https://github.com/JasterV/COVID-19-CHALLENGE/commits?author=JasterV\" title=\"Code\"\u003e💻\u003c/a\u003e\u003c/td\u003e\n  \u003c/tr\u003e\n\u003c/table\u003e\n\n## Show your support\n\nGive us a ⭐️ if you like this project!\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjasterv%2Fsarscov-hierarchy","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fjasterv%2Fsarscov-hierarchy","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjasterv%2Fsarscov-hierarchy/lists"}