{"id":22413808,"url":"https://github.com/jsta/dissertation","last_synced_at":"2025-03-27T03:29:19.822Z","repository":{"id":88675497,"uuid":"235387826","full_name":"jsta/dissertation","owner":"jsta","description":"Spatial Patterning of Lake Nutrients and Morphometry at Macroscales: Importance of Regional Factors and Aquatic-Terrestrial Linkages","archived":false,"fork":false,"pushed_at":"2022-09-23T14:43:11.000Z","size":22345,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-02-01T08:49:09.085Z","etag":null,"topics":["latex","manuscript","research-compendium"],"latest_commit_sha":null,"homepage":"https://github.com/jsta/dissertation/blob/master/stachelek-dissertation.pdf","language":"TeX","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/jsta.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2020-01-21T16:26:37.000Z","updated_at":"2022-11-15T16:17:47.000Z","dependencies_parsed_at":"2023-03-13T18:19:31.579Z","dependency_job_id":null,"html_url":"https://github.com/jsta/dissertation","commit_stats":{"total_commits":149,"total_committers":1,"mean_commits":149.0,"dds":0.0,"last_synced_commit":"ad4e4a5c10fd6aab290319edfaaec2c7786db45f"},"previous_names":[],"tags_count":3,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jsta%2Fdissertation","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jsta%2Fdissertation/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jsta%2Fdissertation/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jsta%2Fdissertation/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jsta","download_url":"https://codeload.github.com/jsta/dissertation/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":245777525,"owners_count":20670554,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["latex","manuscript","research-compendium"],"created_at":"2024-12-05T14:14:38.263Z","updated_at":"2025-03-27T03:29:19.793Z","avatar_url":"https://github.com/jsta.png","language":"TeX","funding_links":[],"categories":[],"sub_categories":[],"readme":"## Spatial Patterning of Lake Nutrients and Morphometry at Macroscales: Importance of Regional Factors and Aquatic-Terrestrial Linkages\n\n\u003e J. Stachelek, Michigan State University, 2020\n\n## Products\n\npdf: [stachelek-dissertation.pdf](stachelek-dissertation.pdf)\n\n## Prerequsites\n\n### R packages\n \n * bookdown\n \n * tinytex\n \n### LaTeX packages\n\nSee [Dockerfile](Dockerfile). Install with `tinytex::tlmgr_install(\"package\")`.\n\n## Building\n\n### pdf + html\n\nFrom the command line type: `$ make all`\n\n## Editing\n\n* The title page, abstract, preface, and introduction source is set in [correct-front-matter.tex](correct-front-matter.tex). Relevant sections need to be copied to [index.Rmd](index.Rmd) if attemping to build an html version.\n\n* Each individual chapter is a numbered Rmd file in the top level folder.\n\n* End matter is set in [end.Rmd](end.Rmd)\n\n* Bibtex files are listed in [index.Rmd](index.Rmd), stored in the top level folder, **and** symlinked (or copied) to the `_bookdown_files` directory\n\n* Figures are stored under [figures](figures) and copied to [_bookdown_files/figures](_bookdown_files/figures)\n\n* Formatting of figure and table captions for supplementary material is set in [preamble.tex](preamble.tex)\n\n* Make LaTeX commands available to the initial Rmd conversion process by placing them in [preamble.tex](preamble.tex)\n\n## Reproducibility\n\n```\ndocker build -t jsta/dissertation:latest .\ndocker create --name dissertation3 jsta/dissertation\ndocker cp dissertation3:~/stachelek-dissertation.pdf test.pdf\n```\n\n## Links\n\nhttps://grad.msu.edu/etd/formatting-guide\n\nhttps://github.com/jrosen48/dissertation\n\nhttps://ctan.org/pkg/msu-thesis?lang=en\n\nhttps://twitter.com/JillDeines/status/991725606311116800\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjsta%2Fdissertation","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fjsta%2Fdissertation","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fjsta%2Fdissertation/lists"}