{"id":19994062,"url":"https://github.com/kapsner/dqastats2ship-dataset","last_synced_at":"2026-03-06T06:04:39.354Z","repository":{"id":108978272,"uuid":"466984433","full_name":"kapsner/DQAstats2ship-dataset","owner":"kapsner","description":"Tutorial for setting up a metadata repository for a dataset to be analyzed with DQAstats","archived":false,"fork":false,"pushed_at":"2022-03-21T18:23:41.000Z","size":22,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-08T23:36:36.879Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://github.com/miracum/dqa-dqastats","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/kapsner.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-03-07T07:17:45.000Z","updated_at":"2022-03-07T08:46:08.000Z","dependencies_parsed_at":"2023-03-20T10:34:10.273Z","dependency_job_id":null,"html_url":"https://github.com/kapsner/DQAstats2ship-dataset","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/kapsner/DQAstats2ship-dataset","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2FDQAstats2ship-dataset","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2FDQAstats2ship-dataset/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2FDQAstats2ship-dataset/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2FDQAstats2ship-dataset/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/kapsner","download_url":"https://codeload.github.com/kapsner/DQAstats2ship-dataset/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2FDQAstats2ship-dataset/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":30164532,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-03-06T04:43:31.446Z","status":"ssl_error","status_checked_at":"2026-03-06T04:40:30.133Z","response_time":250,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-13T04:53:56.670Z","updated_at":"2026-03-06T06:04:39.310Z","avatar_url":"https://github.com/kapsner.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# DQAstats2ship-dataset\n\n\u003c!-- badges: start --\u003e\n\u003c!-- badges: end --\u003e\n\nThe goal of DQAstats2ship-dataset is to provide a step-by-step tutorial on how to prepare a new dataset and corresponding metadata in order to be analyzed with the [`DQAstats`](https://cran.r-project.org/package=DQAstats) R-package.\n\nTherefore, the publicly avaiable SHIP-dataset from the R-package [`dataquieR`](https://cran.r-project.org/package=dataquieR) is used due to its well described metadata. For further information on the dataset as well as the data-quality indicators used in `dataquieR`, please refer to [https://dataquality.ship-med.uni-greifswald.de/](https://dataquality.ship-med.uni-greifswald.de/).\n\nThis tutorial is fully reproducible by rendering the HTML-page using the `bookdown` R-package. All necessary steps required to transform `dataquieR`'s metadata-representation of the SHIP-dataset into `DQAstats`' `mdr.csv`-file are presented in the Rmarkdown document [`index.Rmd`](./index.Rmd).\n\nFinally, `DQAstats`' main function `DQAstats::dqa()` is used to perform the data quality assessment for the SHIP-dataset and to create a PDF report with all results.\n\nAlternatively, it is shown how to launch the shiny app [`DQAgui`](https://cran.r-project.org/package=DQAgui) as a graphical user interface frontend to all the functionality implemented in `DQAstats`.\n\nThe HTML-page with the tutorial can be generated with the following command:\n\n```r\nbookdown::render_book(\n  input = \".\",\n  config_file = \"_bookdown.yml\"\n)\n```\n\n## More Infos\n\n* about `DQAstats`: [https://cran.r-project.org/package=DQAstats](https://cran.r-project.org/package=DQAstats)\n* about `DQAgui`: [https://cran.r-project.org/package=DQAstats](https://cran.r-project.org/package=DQAstats)\n* the `DQAstats`-Wikipage: [https://github.com/miracum/dqa-dqastats/wiki](https://github.com/miracum/dqa-dqastats/wiki)\n* about MIRACUM: [https://www.miracum.org/](https://www.miracum.org/)\n* about the Medical Informatics Initiative: [https://www.medizininformatik-initiative.de/index.php/de](https://www.medizininformatik-initiative.de/index.php/de)\n* about `dataquieR`: [https://cran.r-project.org/package=dataquieR](https://cran.r-project.org/package=dataquieR)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkapsner%2Fdqastats2ship-dataset","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fkapsner%2Fdqastats2ship-dataset","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkapsner%2Fdqastats2ship-dataset/lists"}