{"id":19994055,"url":"https://github.com/kapsner/ldm-ce-mip-lesions","last_synced_at":"2026-02-02T22:13:22.414Z","repository":{"id":232755605,"uuid":"615300913","full_name":"kapsner/ldm-ce-mip-lesions","owner":"kapsner","description":null,"archived":false,"fork":false,"pushed_at":"2024-04-11T08:08:17.000Z","size":2,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-01T22:32:48.561Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/kapsner.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2023-03-17T11:46:04.000Z","updated_at":"2023-03-17T11:46:04.000Z","dependencies_parsed_at":"2024-04-11T09:43:03.177Z","dependency_job_id":"abe0d156-de6f-4a83-9298-e4acbf6b67d3","html_url":"https://github.com/kapsner/ldm-ce-mip-lesions","commit_stats":null,"previous_names":["kapsner/ldm-ce-mip-lesions"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/kapsner/ldm-ce-mip-lesions","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2Fldm-ce-mip-lesions","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2Fldm-ce-mip-lesions/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2Fldm-ce-mip-lesions/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2Fldm-ce-mip-lesions/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/kapsner","download_url":"https://codeload.github.com/kapsner/ldm-ce-mip-lesions/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kapsner%2Fldm-ce-mip-lesions/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":262699775,"owners_count":23350369,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-13T04:53:53.885Z","updated_at":"2026-02-02T22:13:22.356Z","avatar_url":"https://github.com/kapsner.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# ldm-ce-mips-lesions\n\nThis repository contains supporting material of the publication [Lesion-conditioning of synthetic MRI-derived subtraction-MIPs of the breast using a latent diffusion model](https://www.nature.com/articles/s41598-024-56853-1).\n\nCitation:\n\n\u003eKapsner, L.A., Folle, L., Hadler, D. et al. Lesion-conditioning of synthetic MRI-derived subtraction-MIPs of the breast using a latent diffusion model. Sci Rep 14, 6391 (2024). https://doi.org/10.1038/s41598-024-56853-1\n\n## Installation\n\nAt first, prepare your data accordingly and adjust the [config file](configs/latent-diffusion/dce_mip-vq-seg.yaml) as well as the [data loader](https://github.com/kapsner/latent-diffusion/blob/main/ldm/data/dce_mip.py).\n\nTo run the code, then execute the following commands:\n\n```bash\ngit clone -b v0.1.0 https://github.com/kapsner/latent-diffusion\ncd latent-diffusion\n\nconda env create -f environment.yaml\nconda activate ldm\n\nexport parameter_grid=./param_grid_230119.csv\nexport ldm_cfg=./configs/latent-diffusion/dce_mip-vq-seg.yaml\nexport results_folder=/home/user/development/trainings/diffusionmodels\n\npython automate_learnings.py \\\n    -c $parameter_grid \\\n    -b $ldm_cfg \\\n    -l $results_folder\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkapsner%2Fldm-ce-mip-lesions","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fkapsner%2Fldm-ce-mip-lesions","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkapsner%2Fldm-ce-mip-lesions/lists"}