{"id":43716411,"url":"https://github.com/khanlab/tar2bids","last_synced_at":"2026-02-05T07:32:59.179Z","repository":{"id":28742041,"uuid":"119225205","full_name":"khanlab/tar2bids","owner":"khanlab","description":null,"archived":false,"fork":false,"pushed_at":"2025-07-23T15:14:12.000Z","size":302,"stargazers_count":7,"open_issues_count":7,"forks_count":9,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-07-23T17:25:37.810Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/khanlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-01-28T03:46:00.000Z","updated_at":"2024-08-20T15:50:02.000Z","dependencies_parsed_at":"2024-03-01T18:52:31.379Z","dependency_job_id":"8a857d4b-1267-451b-9b23-3faf30e64ab2","html_url":"https://github.com/khanlab/tar2bids","commit_stats":null,"previous_names":[],"tags_count":35,"template":false,"template_full_name":null,"purl":"pkg:github/khanlab/tar2bids","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/khanlab%2Ftar2bids","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/khanlab%2Ftar2bids/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/khanlab%2Ftar2bids/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/khanlab%2Ftar2bids/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/khanlab","download_url":"https://codeload.github.com/khanlab/tar2bids/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/khanlab%2Ftar2bids/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29115573,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-05T05:31:32.482Z","status":"ssl_error","status_checked_at":"2026-02-05T05:31:29.075Z","response_time":65,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2026-02-05T07:32:58.476Z","updated_at":"2026-02-05T07:32:59.172Z","avatar_url":"https://github.com/khanlab.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# tar2bids\n\n```\nRuns dicom tarball(s) to BIDS conversion using heudiconv\nUsage tar2bids  \u003coptional flags\u003e   \u003cin tar file(s)\u003e\n\n Assumes tar files are generated by cfmm2tar or dicom2tar (to find PatientName)\n If this is not the case, please use the -T option.\n\n Optional flags (must appear before required arguments):\n\t-P \u003cpatient name search string\u003e :  default:  *_{subject}\n\t-T \u003ctar name search string\u003e :  uses tarfile name instead of PatientName to search, e.g. '{subject}' if \u003csubject\u003e.tar\n\t-o \u003coutput_dir\u003e : default=./bids\n\t-N \u003cnum parallel cores\u003e : default=0  (max cores)\n\t-h \u003cheuristic.py\u003e : default=cfmm_bold_rest.py\n\t-w \u003ctempdir\u003e  (--tempdir in heudiconv)\n\t-O \"\u003cadditional heudiconv options\u003e\" : default=\n\n Available heuristic files:\n\tcfmm_base.py\n\tcfmm_bold_rest.py\n\tcfmm_PS_PRC_3T.py\n\tEPL14A_GE_3T.py\n\tEPL14B_3T.py\n\tGEvSE.py\n  ```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkhanlab%2Ftar2bids","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fkhanlab%2Ftar2bids","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkhanlab%2Ftar2bids/lists"}