{"id":20215279,"url":"https://github.com/kitwaremedical/2019-imagexd-registration-tutorial","last_synced_at":"2025-10-07T14:05:33.311Z","repository":{"id":66616654,"uuid":"202597905","full_name":"KitwareMedical/2019-ImageXD-Registration-Tutorial","owner":"KitwareMedical","description":null,"archived":false,"fork":false,"pushed_at":"2019-09-23T14:40:37.000Z","size":16245,"stargazers_count":6,"open_issues_count":0,"forks_count":1,"subscribers_count":11,"default_branch":"master","last_synced_at":"2025-06-05T16:07:59.834Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/KitwareMedical.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-08-15T19:13:49.000Z","updated_at":"2020-07-23T10:41:47.000Z","dependencies_parsed_at":null,"dependency_job_id":"37173c9c-7bac-401a-a96a-ae1f4f10507b","html_url":"https://github.com/KitwareMedical/2019-ImageXD-Registration-Tutorial","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/KitwareMedical/2019-ImageXD-Registration-Tutorial","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KitwareMedical%2F2019-ImageXD-Registration-Tutorial","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KitwareMedical%2F2019-ImageXD-Registration-Tutorial/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KitwareMedical%2F2019-ImageXD-Registration-Tutorial/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KitwareMedical%2F2019-ImageXD-Registration-Tutorial/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KitwareMedical","download_url":"https://codeload.github.com/KitwareMedical/2019-ImageXD-Registration-Tutorial/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KitwareMedical%2F2019-ImageXD-Registration-Tutorial/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":278786685,"owners_count":26045591,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-07T02:00:06.786Z","response_time":59,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-14T06:21:04.123Z","updated_at":"2025-10-07T14:05:33.305Z","avatar_url":"https://github.com/KitwareMedical.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# 2019-ImageXD-Registration-Tutorial\n\n## Super Quickstart\n\n[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/KitwareMedical/2019-ImageXD-Registration-Tutorial/master)\n\n\n## Quickstart\n\n```sh\ngit clone https://github.com/KitwareMedical/2019-ImageXD-Registration-Tutorial\ncd 2019-ImageXD-Registration-Tutorial\npython -m pip install -r requirements.txt\njupyter notebook\n```\n\n## Format\n\nThe tutorial consists of lecture segments followed by hands-on\nexercises.  We *strongly encourage* you to bring a laptop with all\nrequired packages installed in order to fully participate.\n\n## Software required\n\n- **Python**\n\n  If you are new to Python, please install the\n  [Anaconda distribution](https://www.continuum.io/downloads) for\n  **Python version 3** (available on OSX, Linux, and Windows).\n  Everyone else, feel free to use your favorite distribution, but\n  please ensure the requirements below are met:\n\n  - `python` \u003e= 3.6\n  - `numpy` \u003e= 1.12\n  - `scipy` \u003e= 1.0\n  - `matplotlib` \u003e= 2.1\n  - `scikit-image` \u003e= 0.15\n  - `itk` \u003e= 5.0.1\n  - `itkwidgets` == 0.18\n\n- **ITK**\n\n  ITK is an open-source toolkit for multidimensional image analysis.\n  If you are using Anaconda, it is easy to install ITK using the\n  [conda-forge](https://conda-forge.org/) repository, through the\n  following command:\n\n  `$ python -m pip install itk`\n\n- **Jupyter**\n\n  The lecture material includes Jupyter notebooks.  Please follow the\n  [Jupyter installation instructions](http://jupyter.readthedocs.io/en/latest/install.html),\n  and ensure you have version 4 or later:\n\n  ```bash\n  $ jupyter --version\n  4.4.0\n  ```\n\n  Please also activate Jupyter Widgets:\n\n  ```\n  python -m pip install -q ipywidgets\n  jupyter nbextension enable --py --sys-prefix itkwidgets widgetsnbextension\n  ```\n\n## Download lecture material\n\n1. [Install Git](https://git-scm.com/downloads)\n2. Clone the repository at [https://github.com/KitwareMedical/2019-ImageXD-Registration-Tutorial](https://github.com/KitwareMedical/2019-ImageXD-Registration-Tutorial)\n\nWe may make editorial corrections to the material until the day before\nthe workshop, so please execute `git pull` to update.\n\n## Install into an environment\n\nOptionally, create a new conda environment or virtual environment.\n\nThen, install the packages:\n\n  `$ python -m pip install -r requirements.txt`\n\n**If you do not have a working setup, please contact the instructors.**\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkitwaremedical%2F2019-imagexd-registration-tutorial","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fkitwaremedical%2F2019-imagexd-registration-tutorial","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkitwaremedical%2F2019-imagexd-registration-tutorial/lists"}