{"id":18123616,"url":"https://github.com/kylase/circosapi","last_synced_at":"2025-04-15T00:51:13.323Z","repository":{"id":3838212,"uuid":"4920118","full_name":"kylase/CircosAPI","owner":"kylase","description":"API-style wrapper for Circos","archived":false,"fork":false,"pushed_at":"2022-07-18T08:53:57.000Z","size":1852,"stargazers_count":9,"open_issues_count":1,"forks_count":0,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-03-28T12:44:41.480Z","etag":null,"topics":["circos","data-visualization","perl"],"latest_commit_sha":null,"homepage":"https://kylase.github.io/CircosAPI","language":"Perl6","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/kylase.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2012-07-06T06:08:01.000Z","updated_at":"2020-01-13T20:16:30.000Z","dependencies_parsed_at":"2022-08-06T14:15:31.906Z","dependency_job_id":null,"html_url":"https://github.com/kylase/CircosAPI","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kylase%2FCircosAPI","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kylase%2FCircosAPI/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kylase%2FCircosAPI/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kylase%2FCircosAPI/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/kylase","download_url":"https://codeload.github.com/kylase/CircosAPI/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248986279,"owners_count":21194025,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["circos","data-visualization","perl"],"created_at":"2024-11-01T07:42:00.336Z","updated_at":"2025-04-15T00:51:13.307Z","avatar_url":"https://github.com/kylase.png","language":"Perl6","readme":"# [CircosAPI v0.6 beta](http://kylase.github.com/CircosAPI)\n\n## APIs for [CIRCOS: Circular Genome Data Visualization](http://www.circos.ca)\n\n\n### Requirements\n1. Perl \u003e 5.12\n2. Moose\n3. JSON::PP\n4. String::Util\n\n## Features\n* Programmatically generate your Circos graphics via Perl\n* Configure your own defaults for your pipelines via JSON\n\nNote: This module is not a syntax checker. You need to know how CIRCOS works.\n\n## Getting Started\n\n### In your script.pl\n    #!/usr/bin/perl\n    use lib::CircosAPI;\n    my $c = CircosAPI-\u003enew();\n\nBy instantiating a new instance of CircosAPI without any parameters will fill the minimal required parameters based on the defaults.json as found in **defaults** directory. You can change the defaults using a JSON file or pass a Hash to the blocks (shown below).\n    \n    my $b = Base-\u003enew(karyotype =\u003e 'hg19');\n    my $id = Ideogram-\u003enew(radius =\u003e '0.95r', thickness =\u003e '20p');\n    my $c = CircosAPI-\u003enew(base =\u003e $b, ideogram =\u003e $id);\n    print $c-\u003ecompile;\n\n### In your shell\n    $ perl script.pl \u003e circos.conf\n    $ circos -conf circos.conf\n\nPlease read the [API reference](https://kylase.github.io/CircosAPI/reference) for more details on the parameters that you need to provide and the default value for some of the parameters if you do not provide them.\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkylase%2Fcircosapi","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fkylase%2Fcircosapi","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fkylase%2Fcircosapi/lists"}