{"id":34522214,"url":"https://github.com/ldrfy/atoms_viewer","last_synced_at":"2026-05-27T01:03:07.570Z","repository":{"id":329938699,"uuid":"1119870262","full_name":"ldrfy/atoms_viewer","owner":"ldrfy","description":"Web-based 3D molecular/atomic structure viewer. trajectory animation playback, high-quality image export, and video recording.","archived":false,"fork":false,"pushed_at":"2026-05-19T12:51:40.000Z","size":1702,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":0,"default_branch":"main","last_synced_at":"2026-05-19T15:45:55.112Z","etag":null,"topics":["lammps","lammps-data","pdb","visualization","xyz"],"latest_commit_sha":null,"homepage":"https://ldrfy.github.io/atoms_viewer/","language":"TypeScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ldrfy.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":"AGENTS.md","dco":null,"cla":null}},"created_at":"2025-12-20T02:22:19.000Z","updated_at":"2026-05-19T12:51:45.000Z","dependencies_parsed_at":null,"dependency_job_id":null,"html_url":"https://github.com/ldrfy/atoms_viewer","commit_stats":null,"previous_names":["ldrfy/ldr_atoms_viewer"],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/ldrfy/atoms_viewer","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ldrfy%2Fatoms_viewer","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ldrfy%2Fatoms_viewer/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ldrfy%2Fatoms_viewer/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ldrfy%2Fatoms_viewer/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ldrfy","download_url":"https://codeload.github.com/ldrfy/atoms_viewer/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ldrfy%2Fatoms_viewer/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":33545459,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-05-26T15:22:16.424Z","status":"ssl_error","status_checked_at":"2026-05-26T15:22:15.568Z","response_time":63,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["lammps","lammps-data","pdb","visualization","xyz"],"created_at":"2025-12-24T04:59:26.444Z","updated_at":"2026-05-27T01:03:07.534Z","avatar_url":"https://github.com/ldrfy.png","language":"TypeScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"\u003cdiv align=\"center\"\u003e\n  \u003ca href=\"https://github.com/ldrfy/atoms_viewer\"\u003e\n    \u003cimg alt=\"LDR Atoms Viewer Logo\" width=\"200\" src=\"./public/lav.svg\"\u003e\n  \u003c/a\u003e\n  \u003cbr\u003e\n  \u003cbr\u003e\n\n[![license](https://img.shields.io/github/license/ldrfy/atoms_viewer.svg)](LICENSE)\n\n  \u003ch1\u003eLDR Atoms Viewer\u003c/h1\u003e\n\n[![CHI](https://img.shields.io/badge/CHI-%E4%B8%AD%E6%96%87-red?style=for-the-badge)](readme/README_ZH.md) [![ENG](https://img.shields.io/badge/ENG-English-blue?style=for-the-badge)](README.md)\n\n\u003c/div\u003e\n\n![start](https://raw.githubusercontent.com/ldrfy/atoms_viewer_docs/refs/tags/v1.0.0/docs/site/public/img/en/start.jpg)\n\n## 🚀 Get Started\n\n- Visit [Web: Ldr-Atoms-Viewer](https://ldrfy.github.io/atoms_viewer/)\n- Upload your own model file (formats listed in [Multi-Format Support](#multi-format-support))\n\n## Overview\n\nLDR Atoms Viewer is a web-based atomic structure visualization tool. Upload atomic coordinate files to generate 3D structures, then fine-tune the display (rotation, atom size, atom color, bond thickness, etc.). It supports one-click export of transparent or colored, auto-cropped high-resolution PNGs, and can record animations.\n\nBuilt with a modern front-end stack, the experience is smooth and performance-focused.\n\n## Features\n\n### Multi-Layer\n\nDrag in multiple coordinate files to display multiple structures at once, and show or hide layers as needed.\n\n### Video Recording\n\nModels can auto-rotate around different symmetry axes. Record the rotation process or motion trajectory, with customizable recording regions and background colors.\n\n### File Export\n\n- Image export: transparent or colored background, adjustable resolution, auto-cropped bounding box\n- Format conversion: export to formats such as `xyz` from supported inputs\n- Project package: bundle models plus all layer settings for sharing and restoring\n- Settings export: export layers, background, view, and camera distance in one file\n\n### Smooth Performance \u0026 Multi-Device Support\n\nSupports loading hundreds of thousands of atoms, and works on mobile and desktop.\n\n### Multi-Format Support\n\nSupported formats: `lammps-data`, `lammps-dump`, `pdb`, `mol`, `sdf`, `xyz`. Both `xyz` and `lammps-dump` support trajectory playback.\n\nMultiple model files can also be packaged into a single `zip` and dragged into the viewer for batch loading.\n\n### Rich Customization\n\nMulti-language, dark/light themes, precise rotation control, atom size, atom color, bond thickness, visibility toggles, axes display, and more.\n\n## 🏗️ Development Testing\n\n### Prerequisites\n\n- node25\n- pnpm10\n\n### Install \u0026 Run\n\n```bash\npnpm install\npnpm dev\n```\n\n### Build\n\n```bash\npnpm build\npnpm preview\n```\n\n## Reference \u0026 Credits\n\nThis project is inspired by the following online viewer in interaction design and goals, but is more modern in implementation, with better performance and smoother interaction:\n\n[openmx-viewer](https://www.openmx-square.org/viewer/index.html)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fldrfy%2Fatoms_viewer","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fldrfy%2Fatoms_viewer","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fldrfy%2Fatoms_viewer/lists"}