{"id":22021680,"url":"https://github.com/lieberinstitute/shinycsv","last_synced_at":"2025-05-07T06:42:04.553Z","repository":{"id":113732259,"uuid":"72884509","full_name":"LieberInstitute/shinycsv","owner":"LieberInstitute","description":"Interactively explore a table","archived":false,"fork":false,"pushed_at":"2024-12-10T21:04:50.000Z","size":529,"stargazers_count":7,"open_issues_count":1,"forks_count":1,"subscribers_count":10,"default_branch":"devel","last_synced_at":"2025-03-31T07:22:10.383Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://lieberinstitute.github.io/shinycsv/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/LieberInstitute.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS","contributing":".github/CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":".github/SUPPORT.md","governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2016-11-04T20:52:56.000Z","updated_at":"2024-12-10T21:04:54.000Z","dependencies_parsed_at":null,"dependency_job_id":"830b61f6-f29a-45e6-824e-88db0185fced","html_url":"https://github.com/LieberInstitute/shinycsv","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fshinycsv","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fshinycsv/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fshinycsv/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fshinycsv/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute","download_url":"https://codeload.github.com/LieberInstitute/shinycsv/tar.gz/refs/heads/devel","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":252831069,"owners_count":21810775,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-30T06:13:38.030Z","updated_at":"2025-05-07T06:42:04.548Z","avatar_url":"https://github.com/LieberInstitute.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"---\noutput: github_document\n---\n\n\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r, include = FALSE}\nknitr::opts_chunk$set(\n    collapse = TRUE,\n    comment = \"#\u003e\",\n    fig.path = \"man/figures/README-\",\n    out.width = \"100%\"\n)\n```\n\n# shinycsv\n\n\u003c!-- badges: start --\u003e\n[![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable)\n[![Codecov test coverage](https://codecov.io/gh/LieberInstitute/shinycsv/branch/devel/graph/badge.svg)](https://codecov.io/gh/LieberInstitute/shinycsv?branch=devel)\n[![R build status](https://github.com/LieberInstitute/shinycsv/actions/workflows/check-bioc.yml/badge.svg)](https://github.com/LieberInstitute/shinycsv/actions/workflows/check-bioc.yml)\n[![GitHub issues](https://img.shields.io/github/issues/LieberInstitute/shinycsv)](https://github.com/LieberInstitute/shinycsv/issues)\n[![GitHub pulls](https://img.shields.io/github/issues-pr/LieberInstitute/shinycsv)](https://github.com/LieberInstitute/shinycsv/pulls)\n[![DOI](https://zenodo.org/badge/72884509.svg)](https://zenodo.org/badge/latestdoi/72884509)\n\u003c!-- badges: end --\u003e\n\nThis package allows interactive explorations of CSV files, data.frame objects stored in a Rdata file (only one data.frame stored), or other types of table files. You can view this shiny app deployed at [libd.shinyapps.io/shinycsv](https://libd.shinyapps.io/shinycsv/). If you are interested in the [showcase mode](http://shiny.rstudio.com/articles/display-modes.html), then check out [libd.shinyapps.io/shinycsv-showcase](https://libd.shinyapps.io/shinycsv-showcase/).\n\nThe vignette for this package is available at [LieberInstitute/shinycsv](http://Lieberinstitute.github.io/shinycsv/).\n\n## Installation instructions\n\nGet the latest stable `R` release from [CRAN](http://cran.r-project.org/). Then install `shinycsv` from [GitHub](https://github.com/LieberInstitute/shinycsv) with:\n\n```{r 'install_dev', eval = FALSE}\nBiocManager::install(\"LieberInstitute/shinycsv\")\n```\n\n## Citation\n\nBelow is the citation output from using `citation('shinycsv')` in R. Please\nrun this yourself to check for any updates on how to cite __shinycsv__.\n\n```{r 'citation', eval = requireNamespace('shinycsv')}\nprint(citation(\"shinycsv\"), bibtex = TRUE)\n```\n\nPlease note that the `shinycsv` was only made possible thanks to many other R and bioinformatics software authors, which are cited either in the vignettes and/or the paper(s) describing this package.\n\n## Code of Conduct\n\nPlease note that the `shinycsv` project is released with a [Contributor Code of Conduct](http://bioconductor.org/about/code-of-conduct/). By contributing to this project, you agree to abide by its terms.\n\n## Development tools\n\n* Continuous code testing is possible thanks to [GitHub actions](https://www.tidyverse.org/blog/2020/04/usethis-1-6-0/)  through `r BiocStyle::CRANpkg('usethis')`, `r BiocStyle::CRANpkg('remotes')`, and `r BiocStyle::CRANpkg('rcmdcheck')` customized to use [Bioconductor's docker containers](https://www.bioconductor.org/help/docker/) and `r BiocStyle::Biocpkg('BiocCheck')`.\n* Code coverage assessment is possible thanks to [codecov](https://codecov.io/gh) and `r BiocStyle::CRANpkg('covr')`.\n* The [documentation website](http://LieberInstitute.github.io/shinycsv) is automatically updated thanks to `r BiocStyle::CRANpkg('pkgdown')`.\n* The code is styled automatically thanks to `r BiocStyle::CRANpkg('styler')`.\n* The documentation is formatted thanks to `r BiocStyle::CRANpkg('devtools')` and `r BiocStyle::CRANpkg('roxygen2')`.\n\nFor more details, check the `dev` directory.\n\nThis package was developed using `r BiocStyle::Biocpkg('biocthis')`.\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flieberinstitute%2Fshinycsv","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Flieberinstitute%2Fshinycsv","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flieberinstitute%2Fshinycsv/lists"}