{"id":19434408,"url":"https://github.com/likelet/rscriptcollection","last_synced_at":"2025-04-24T20:32:04.561Z","repository":{"id":86650919,"uuid":"94214744","full_name":"likelet/RscriptCollection","owner":"likelet","description":"Rscripts collection for ploting in daily research life","archived":false,"fork":false,"pushed_at":"2021-01-15T03:04:23.000Z","size":7005,"stargazers_count":10,"open_issues_count":0,"forks_count":2,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-04-22T00:18:49.199Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/likelet.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2017-06-13T13:14:57.000Z","updated_at":"2021-01-15T03:14:42.000Z","dependencies_parsed_at":"2023-03-11T20:30:59.333Z","dependency_job_id":null,"html_url":"https://github.com/likelet/RscriptCollection","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/likelet%2FRscriptCollection","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/likelet%2FRscriptCollection/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/likelet%2FRscriptCollection/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/likelet%2FRscriptCollection/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/likelet","download_url":"https://codeload.github.com/likelet/RscriptCollection/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":250704794,"owners_count":21473764,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-10T14:46:21.328Z","updated_at":"2025-04-24T20:32:04.556Z","avatar_url":"https://github.com/likelet.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# RscriptCollection\nThis repo collected the custmized R script and the relavent plot.\nCurrently, only a few scripts were presented on git and i will be happy to write the datail usage of each script to make it repproductive for others.\n\n## Project structure\n\n| Directory | Content |\n| --------- | ------- |\n| [images](images) | Hold images produced by scripts |\n| [scriptsWithData](scriptsWithData) | Maintain scripts (and data if exists) |\n \n## Gallery\n\n### Cleavage plot\n\n![Cleavage plot](images/cleavage_plot.png)\n\n### Tumor VS Met plot\n\n![Tumor VS Met plot](images/met_VS_tum.png)\n\n### Gene cumsum number plot\n\n![Gene cumsum number plot](images/gene_cumsum_num.png)\n\n### Gene expression Box plot in TCGA pancancer \n\n![Gene expression boxplot in TCGA](images/geneExpression_tcga.png)\n\n### Indel ditribution plot based on Crispr cas9 PCR result \n\n![Indel distribution plot](images/Indel_distribution.png)\n\n### Forest plot \n\n![Forest plot](images/forestplot.png)\n\n### BarRatio Plot\n\n![BarRatioplot](images/barRatioPlot.png)\n\n### Heatmap for cfDNA\n\n![heatmapForcfDNA](images/heatmapForcfDNA.png)\n\n## How to contribute\n\nFork this repo, then add/modify contents according to the [structure](#project-structure).\n\nFor scripts with data, you should create a **new folder** then place them in. For single script, just leave it alone.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flikelet%2Frscriptcollection","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Flikelet%2Frscriptcollection","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flikelet%2Frscriptcollection/lists"}