{"id":26573278,"url":"https://github.com/linsalrob/phispyanalysis","last_synced_at":"2025-09-08T20:41:22.782Z","repository":{"id":41252821,"uuid":"345488365","full_name":"linsalrob/PhispyAnalysis","owner":"linsalrob","description":"Analysis of phispy data","archived":false,"fork":false,"pushed_at":"2023-05-25T14:51:51.000Z","size":71660,"stargazers_count":4,"open_issues_count":0,"forks_count":2,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-04-08T21:32:22.929Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/linsalrob.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2021-03-08T00:39:39.000Z","updated_at":"2023-02-03T18:10:39.000Z","dependencies_parsed_at":"2023-01-26T05:00:58.163Z","dependency_job_id":null,"html_url":"https://github.com/linsalrob/PhispyAnalysis","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/linsalrob/PhispyAnalysis","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/linsalrob%2FPhispyAnalysis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/linsalrob%2FPhispyAnalysis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/linsalrob%2FPhispyAnalysis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/linsalrob%2FPhispyAnalysis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/linsalrob","download_url":"https://codeload.github.com/linsalrob/PhispyAnalysis/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/linsalrob%2FPhispyAnalysis/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274231505,"owners_count":25245601,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-03-23T00:40:01.257Z","updated_at":"2025-09-08T20:41:22.752Z","avatar_url":"https://github.com/linsalrob.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"[![Edwards Lab](https://img.shields.io/badge/Bioinformatics-EdwardsLab-03A9F4)](https://edwards.sdsu.edu/research)\n[![DOI](https://www.zenodo.org/badge/273771924.svg)](https://www.zenodo.org/badge/latestdoi/273771924)\n[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)\n![GitHub language count](https://img.shields.io/github/languages/count/linsalrob/PhiSpy)\n\n# PhispyAnalysis\n\nThis data contains the accessory data and analysis scripts for our analysis of prophages reported in `Unveiling Hidden Prophage Diversity` which is currently in preparation.\n\nThe prophage predictions are available from [Cloudstor](https://cloudstor.aarnet.edu.au/plus/s/DSTTqlxtEKwcXFC) and will be available from FigShare shortly.\n\n## [data](data)\n\nThe data directory contains data frames from a variety of sources. See the [README](data/) for more information on those sources.\n\n# CITE THIS PAPER\n\n`Unveiling Hidden Prophage Diversity`\nMcKerral-Fisher _et al.,_ Manuscript in preparation\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flinsalrob%2Fphispyanalysis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Flinsalrob%2Fphispyanalysis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Flinsalrob%2Fphispyanalysis/lists"}