{"id":21274792,"url":"https://github.com/maayanlab/multiomics2targets","last_synced_at":"2025-03-15T12:44:57.371Z","repository":{"id":245891706,"uuid":"788636065","full_name":"MaayanLab/Multiomics2Targets","owner":"MaayanLab","description":"Expression to Kinases and Target Ranger","archived":false,"fork":false,"pushed_at":"2024-09-25T04:39:03.000Z","size":42771,"stargazers_count":1,"open_issues_count":2,"forks_count":0,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-01-22T03:15:03.003Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/MaayanLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-04-18T19:47:59.000Z","updated_at":"2024-12-22T18:05:15.000Z","dependencies_parsed_at":"2024-08-22T20:52:29.217Z","dependency_job_id":"4a1a7b29-02b8-4813-838a-d190debbfafe","html_url":"https://github.com/MaayanLab/Multiomics2Targets","commit_stats":null,"previous_names":["maayanlab/multiomics2targets"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MaayanLab%2FMultiomics2Targets","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MaayanLab%2FMultiomics2Targets/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MaayanLab%2FMultiomics2Targets/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MaayanLab%2FMultiomics2Targets/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/MaayanLab","download_url":"https://codeload.github.com/MaayanLab/Multiomics2Targets/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243732253,"owners_count":20338831,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-21T09:25:37.592Z","updated_at":"2025-03-15T12:44:57.349Z","avatar_url":"https://github.com/MaayanLab.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# MULTIOMICS2TARGETS: \n### Expression2Kinases \u0026 Target Ranger\n\nCurrently hosted at: https://multiomics2targets.maayanlab.cloud/\n\n\n## Getting Started\nTo run in development:\n```bash\n# prepare .env file \u0026 review\ncp .env.example .env\n# create and activate python3.8 (or python3.9) virtual environment\npython3.9 -m venv venv\nsource venv/bin/activate\npip install -r requirements.txt\n# install relevant R dependencies\nR -e \"source('setup.R')\"\n# run in development\nappyter main.ipynb\n```\n\n## Running locally\nTo run the Multiomics2Targets app locally first ensure that [Docker](https://www.docker.com/) is installed, and then run the following command:\n```bash\ndocker run --device /dev/fuse --cap-add SYS_ADMIN --security-opt apparmor:unconfined -p 5000:5000 -it maayanlab/x2ktr:0.1.05\n```\nTo receive automatically generated descriptions of the results, you need to provide an [OpenAI API Key](https://openai.com/index/openai-api/) as an environment variable:\n```bash\ndocker run --device /dev/fuse --cap-add SYS_ADMIN --security-opt apparmor:unconfined -p 5000:5000 -e OPENAI_API_KEY=sk-… -it maayanlab/x2ktr:0.1.05\n```\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmaayanlab%2Fmultiomics2targets","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmaayanlab%2Fmultiomics2targets","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmaayanlab%2Fmultiomics2targets/lists"}