{"id":23813969,"url":"https://github.com/markf94/markf94","last_synced_at":"2026-02-28T03:06:02.008Z","repository":{"id":69281725,"uuid":"359219521","full_name":"markf94/markf94","owner":"markf94","description":"Personal Github profile repo.","archived":false,"fork":false,"pushed_at":"2026-02-27T20:17:32.000Z","size":55,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2026-02-28T00:37:43.993Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/markf94.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2021-04-18T18:12:20.000Z","updated_at":"2026-02-27T20:17:36.000Z","dependencies_parsed_at":"2024-06-28T22:52:25.482Z","dependency_job_id":null,"html_url":"https://github.com/markf94/markf94","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/markf94/markf94","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markf94%2Fmarkf94","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markf94%2Fmarkf94/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markf94%2Fmarkf94/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markf94%2Fmarkf94/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/markf94","download_url":"https://codeload.github.com/markf94/markf94/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markf94%2Fmarkf94/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29923433,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-27T19:37:42.220Z","status":"online","status_checked_at":"2026-02-28T02:00:07.010Z","response_time":90,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-01-02T03:46:00.205Z","updated_at":"2026-02-28T03:06:02.001Z","avatar_url":"https://github.com/markf94.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"### Welcome, human! I'm Mark 👋\n\n[![Pronouns](https://img.shields.io/badge/Pronouns-he%2Fhim-white)](https://uwm.edu/lgbtrc/support/gender-pronouns/)\n[![Canada](https://img.shields.io/badge/Nationality-Canada-red?style=flat\u0026logo=Canada)](https://maps.app.goo.gl/oJnKkoXgeLYH2bZJ9)\n[![Nationality](https://img.shields.io/badge/Nationality-German-gold)](https://maps.app.goo.gl/8JfGHrRFA5PS5Vu26)\n[![Location](https://img.shields.io/badge/Location-Toronto%2C%20Canada-blue)](https://goo.gl/maps/oX2GBATc4ev1mgLT6)\n\nI'm a scientific ML leader and entrepreneur with a background in theoretical physics. I co-founded the Toronto-based biotech [ProteinQure](https://proteinqure.com), where I lead the scientific ML team and help build a ML-driven platform for protein and peptide therapeutics (think 3D CAD for molecules). I also co-founded the [Quantum Open Source Foundation](https://qosf.org) (QOSF).\n\nMy work focuses on generative models for proteins and peptides, molecular property prediction, multi-property optimization, and scalable production ML systems for drug discovery. At ProteinQure, I work closely with a multidisciplinary team on proprietary ML models for peptide drug delivery and discovery, spanning model development, optimization, experimental validation and real-world experimental integration.\n\nTechnically, I spend time on diffusion-based generative models (e.g. [RFDiffusion](https://github.com/RosettaCommons/RFdiffusion), [BindCraft](https://github.com/martinpacesa/BindCraft)) with steering \u0026 guidance, multi-objective optimization algorithms such as Monte Carlo Tree Search or evolutionary algorithms (using [deap](https://github.com/DEAP/deap)), Bayesian optimization, and custom ML tooling for scientific workflows. My MSc research explored learning curves of quantum kernel machines, using quantum–classical hybrid models built with built with [PennyLane](https://github.com/PennyLaneAI/pennylane) and [TensorFlow Quantum](https://github.com/tensorflow/quantum).\n\nQuick facts:\n\n- 💬 Ask me about **scientific ML, protein design, drug discovery, Python, quantum computing, and open-source software**\n- 📫 Talk to me via *hello@markfingerhuth.ai*\n- ⚡ Fun fact: **I like climbing frozen waterfalls in the middle of winter.**\n\nSnapshot:\n\n- 💻 My current favourite open source project is **[Polaris - Benchmarks for AI models in drug discovery](https://github.com/polaris-hub/polaris)**\n- 🌱 I’m currently learning: **modular synthesis**, **Vietnamese**, **trad climbing**\n- 👯 I’m looking to collaborate on **Protein Drug Discovery** and **Quantum Open Source Software**\n- ⌨️ My work setup consists of: [Warp Terminal](https://www.warp.dev/) + [Claude Code](https://code.claude.com/docs/en/overview) + [ralph](https://github.com/snarktank/ralph)\n- 🎮 I’m currently playing **ARC Raiders**\n- 🚐 I’m currently **climbing frozen waterfalls** and **making music on my modular synthesizer**\n\n[![Twitter Follow](https://img.shields.io/twitter/follow/mark_fingerhuth?style=social)](https://twitter.com/mark_fingerhuth)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmarkf94%2Fmarkf94","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmarkf94%2Fmarkf94","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmarkf94%2Fmarkf94/lists"}