{"id":20915674,"url":"https://github.com/markovmodel/deep_rev_msm","last_synced_at":"2025-08-20T02:05:33.903Z","repository":{"id":85634011,"uuid":"228393231","full_name":"markovmodel/deep_rev_msm","owner":"markovmodel","description":null,"archived":false,"fork":false,"pushed_at":"2020-01-21T17:36:53.000Z","size":2402,"stargazers_count":2,"open_issues_count":0,"forks_count":1,"subscribers_count":7,"default_branch":"master","last_synced_at":"2025-08-14T12:00:01.381Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/markovmodel.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-12-16T13:27:20.000Z","updated_at":"2024-04-16T16:46:51.000Z","dependencies_parsed_at":"2023-03-06T22:30:31.713Z","dependency_job_id":null,"html_url":"https://github.com/markovmodel/deep_rev_msm","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/markovmodel/deep_rev_msm","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markovmodel%2Fdeep_rev_msm","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markovmodel%2Fdeep_rev_msm/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markovmodel%2Fdeep_rev_msm/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markovmodel%2Fdeep_rev_msm/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/markovmodel","download_url":"https://codeload.github.com/markovmodel/deep_rev_msm/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/markovmodel%2Fdeep_rev_msm/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271252993,"owners_count":24726918,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-20T02:00:09.606Z","response_time":69,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-18T16:17:16.310Z","updated_at":"2025-08-20T02:05:33.850Z","avatar_url":"https://github.com/markovmodel.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"Deep_rev_msm\nDeep learning Markov and Koopman models with physical constraints.\n\n\n## What is it?\nDeep_rev_msm is summarized the implementations of the work presented in the paper \"Deep learning Markov and Koopman models with physical constraints.\" (described in https://arxiv.org/abs/1912.07392). It includes a Jupyter notebook able to reproduce the results presented in the paper and a benchmark file.\n\n\n## Citation\nIf you use Deep reversible models presented in this paper in scientific work, please cite:\n\n    Mardt, A., Pasquali, L., Noé, F. \u0026 Wu, H. (2019). \n    Deep learning Markov and Koopman models with physical constraints. \n    arXiv, 1912.07392.\n\n## Installation\n\nWe are using the package vampnet from the repo https://github.com/markovmodel/deeptime/tree/master/vampnet\nIMPORTANT: We are using tensorflow 1.14\n\nThis package requires [Tensorflow](https://www.tensorflow.org) to be used.\nPlease install either tensorflow or tensorflow-gpu. Installation instructions:\n\nhttps://www.tensorflow.org/install/\n\nTo use the notebook yourself, first clone the repository:\n\ngit clone https://github.com/markovmodel/deep_rev_msm.git\n\nThen you can directly start.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmarkovmodel%2Fdeep_rev_msm","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmarkovmodel%2Fdeep_rev_msm","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmarkovmodel%2Fdeep_rev_msm/lists"}