{"id":18658701,"url":"https://github.com/mcellteam/workshop_2020","last_synced_at":"2025-11-05T23:30:38.463Z","repository":{"id":152893674,"uuid":"256211052","full_name":"mcellteam/Workshop_2020","owner":"mcellteam","description":"Repository for models, descriptions, and software supporting the 2020 Workshop","archived":false,"fork":false,"pushed_at":"2020-06-26T20:18:59.000Z","size":43363,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":19,"default_branch":"master","last_synced_at":"2024-12-27T15:28:25.285Z","etag":null,"topics":["bionetgen","cellblender","cellblender-model","cellorganizer","mcell","mcell-tutorials","simulation"],"latest_commit_sha":null,"homepage":"","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/mcellteam.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2020-04-16T12:39:45.000Z","updated_at":"2020-06-26T20:19:01.000Z","dependencies_parsed_at":null,"dependency_job_id":"12a60a23-f866-474d-8755-2401ad27c5ff","html_url":"https://github.com/mcellteam/Workshop_2020","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mcellteam%2FWorkshop_2020","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mcellteam%2FWorkshop_2020/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mcellteam%2FWorkshop_2020/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mcellteam%2FWorkshop_2020/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/mcellteam","download_url":"https://codeload.github.com/mcellteam/Workshop_2020/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":239475962,"owners_count":19645041,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bionetgen","cellblender","cellblender-model","cellorganizer","mcell","mcell-tutorials","simulation"],"created_at":"2024-11-07T07:34:05.380Z","updated_at":"2025-02-18T12:56:34.886Z","avatar_url":"https://github.com/mcellteam.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Workshop 2020\n## Repository for models, descriptions, and code to be used for the 2020 Workshop.\n\n### Note that the following links have not been updated from the 2019 Workshop:\n* [Final agenda](https://docs.google.com/document/d/1LWj4nWpN9DQXcbmkdRHLM3NcIQpZi1vK-eVuUm3SqTA/edit?usp=sharing). (currently 2019 version)\n* [Introductory slides](https://www.dropbox.com/s/qxxjsjkbvyqdomz/CMW2019-MMBioSIntro.pptx?dl=0) (currently 2019 version)\n* Join the workshop slack channel [here](https://join.slack.com/t/cmw2019/shared_invite/enQtNjMwNzUwNjQzNjQ4LTliMzMwMTAxODRmYzUwZGE2NzYyZTE0Mjg1NjRkNzU4NDk3MDllNDUyYTEzMGY3MTA3ZTlmOTAzN2ZhYWQwMjY). (currently 2019 version)\n* Links to slides for the presentations on the individual tools are on the respective pages below.\n\nPages for each of the three major tools used in the workshop:\n* **[BioNetGen](bionetgen)**\n* **[CellBlender](cellblender)**\n* **[CellOrganizer](cellorganizer)**\n\n\n![Cell1 in CellBlender/MCell](cellblender/Cell1_Test1.gif?raw=true \"Cell1 in CellBlender/MCell\")\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmcellteam%2Fworkshop_2020","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmcellteam%2Fworkshop_2020","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmcellteam%2Fworkshop_2020/lists"}