{"id":18858291,"url":"https://github.com/metaphorme/zincdownloader","last_synced_at":"2026-02-06T11:41:44.600Z","repository":{"id":53852410,"uuid":"521692340","full_name":"Metaphorme/zincDownloader","owner":"Metaphorme","description":"An easy multithreaded zinc database downloader.","archived":false,"fork":false,"pushed_at":"2022-08-09T11:00:21.000Z","size":30,"stargazers_count":3,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-07-18T10:52:24.260Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Metaphorme.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2022-08-05T15:40:59.000Z","updated_at":"2023-10-23T13:07:57.000Z","dependencies_parsed_at":"2022-08-13T03:01:11.308Z","dependency_job_id":null,"html_url":"https://github.com/Metaphorme/zincDownloader","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/Metaphorme/zincDownloader","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Metaphorme%2FzincDownloader","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Metaphorme%2FzincDownloader/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Metaphorme%2FzincDownloader/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Metaphorme%2FzincDownloader/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Metaphorme","download_url":"https://codeload.github.com/Metaphorme/zincDownloader/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Metaphorme%2FzincDownloader/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29159689,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-06T07:18:23.844Z","status":"ssl_error","status_checked_at":"2026-02-06T07:13:32.659Z","response_time":59,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-08T04:11:45.233Z","updated_at":"2026-02-06T11:41:44.583Z","avatar_url":"https://github.com/Metaphorme.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# zincDownloader  \nAn easy multithreaded zinc database downloader.\n\n## Usage\n1. Get zincDownloader  \n    ```bash\n    git clone https://github.com/Metaphorme/zincDownloader.git\n    ```\n\n2. Install dependencies  \n    ```bash\n    cd zincDownloader\n    pip3 install -r requirements.txt\n    ```\n\n3. Remove examples  \n    `B_D_SP.csv, output/*.sdf`, `downloadList.txt` are examples for demonstration.  \n    Remove them if you are already proficient with this tool.\n    ```bash\n    rm -f output/*.sdf downloadList.txt\n    ```\n\n4. Edit the settings  \n    Please edit `main.py`\n    ```python\n    # ------------------------------ IMPORTENT--SETTINGS ------------------------------\n\n    # Please specify the CSV filename and the column that contains ZINC Title here.\n    CSVfilename = \"B_D_SP.csv\"\n    Column = 1\n    # DownloadType, selectable from \"SMILES\", \"SDF\", \"CSV\", \"XML\", \"JSON\".\n    DownloadType = \"SDF\"\n    # If GetDownloadListOnly is set to True, this tool will only generate the \n    # downloadList.txt, then you can download on remote or with other tools like aria2.\n    GetDownloadListOnly = False\n    # The number of threads to download. PLEASE DON'T SET TO HIGER THAN 5!!!\n    DownloadThread = 3\n\n    # --------------------------------- FINISH---LINE ---------------------------------\n    ```\n\n5. Run  \n    ```bash\n    python3 main.py\n    ```\n\n## Credits\n```\n       .__              ________                      .__                    .___            \n_______|__| ____   ____ \\______ \\   ______  _  ______ |  |   _________     __| _/___________  \n\\___   /  |/    \\_/ ___\\ |    |  \\ /  _ \\ \\/ \\/ /    \\|  |  /  _ \\__  \\   / __ |/ __ \\_  __ \\  \n /    /|  |   |  \\  \\___ |    `   (  \u003c_\u003e )     /   |  \\  |_(  \u003c_\u003e ) __ \\_/ /_/ \\  ___/|  | \\\\  \n/_____ \\__|___|  /\\___  \u003e_______  /\\____/ \\/\\_/|___|  /____/\\____(____  /\\____ |\\___  \u003e__|  \n      \\/       \\/     \\/        \\/                  \\/                \\/      \\/    \\/   \n```\nzincDownloader, An easy multithreaded zinc database downloader.  \nThanks: [ZINC](https://zinc.docking.org/), zinc.docking.org, provided by [UCSF](https://pharmchem.ucsf.edu/).  \nAuthor: [Metaphorme](https://blog.metaphorme.net/), github.com/Metaphorme, in [CPU](https://www.cpu.edu.cn/).  \nLicensed under the MIT License.  \n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmetaphorme%2Fzincdownloader","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmetaphorme%2Fzincdownloader","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmetaphorme%2Fzincdownloader/lists"}