{"id":26895861,"url":"https://github.com/mittelmark/pbi","last_synced_at":"2025-04-01T02:58:54.678Z","repository":{"id":227484990,"uuid":"769172789","full_name":"mittelmark/pbi","owner":"mittelmark","description":"R package with functions for the course Practical Bioinformatics at the University of Potsdam","archived":false,"fork":false,"pushed_at":"2025-03-18T14:45:18.000Z","size":225,"stargazers_count":1,"open_issues_count":1,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-18T15:45:14.009Z","etag":null,"topics":["machine-learning","package","r","statistics","teaching"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/mittelmark.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2024-03-08T13:48:34.000Z","updated_at":"2025-03-18T14:45:22.000Z","dependencies_parsed_at":"2024-03-13T15:53:58.419Z","dependency_job_id":null,"html_url":"https://github.com/mittelmark/pbi","commit_stats":null,"previous_names":["mittelmark/pbi"],"tags_count":1,"template":false,"template_full_name":"mittelmark/Rpkg","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mittelmark%2Fpbi","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mittelmark%2Fpbi/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mittelmark%2Fpbi/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mittelmark%2Fpbi/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/mittelmark","download_url":"https://codeload.github.com/mittelmark/pbi/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246574850,"owners_count":20799221,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["machine-learning","package","r","statistics","teaching"],"created_at":"2025-04-01T02:58:54.075Z","updated_at":"2025-04-01T02:58:54.671Z","avatar_url":"https://github.com/mittelmark.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# pbi - R package for Practical Bioinformatics ![](../../actions/workflows/r.yml/badge.svg)\n\nThis is a package  for the  course  Practical  Bioinformatics  for the  Master\ncourse Molecular Biology and Biochemistry at the University of Potsdam.\nThe package contains functions and data used in the lectures and exercises of this course.\n\n## Installation\n\nTo install the package you can either use the package  remotes to install from\nthe current github sources or you download and install the latest release.\n\nFirst let's show how to install the latest version directly from Gihub:\n\n```\n\u003e install.packages(\"remotes\")\n\u003e library(remotes)\n\u003e remotes::install_github(\"https://github.com/mittelmark/pbi\")\n```\n\nTo install instead the latest release version which should be more stable use the following command:\n\n```\n\u003e install.packages(\"https://github.com/mittelmark/pbi/releases/download/v0.1.1/pbi_0.1.1.tar.gz\")\n```\n\n## Package documentation\n\nThe package documentation for version 0.1.0 can be seen here: [pbi-manual.pdf](https://github.com/mittelmark/pbi/files/14588148/pbi-manual.pdf)\n\nThe vignette can be viewed after installing the package by writing into the terminal this: `vignette(\"pbi-tutorial\")`\n\n\n## Author and Copyright\n\nAuthor: Detlef Groth, University of Potsdam, Germany\n\nCo-authors: \n\n- Vera Burdova, University of Potsdam, Germany\n- Jillian Hoffmann, University of Potsdam, Germany\n- Lisa Banu Kurt, University of Potsdam, Germany\n\nLicense: MIT License see the file [LICENSE](LICENSE) for details.\n\n## Bug reporting\n\nIn case of bugs and suggestions, use the [issues](../../issues) link on top.\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmittelmark%2Fpbi","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmittelmark%2Fpbi","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmittelmark%2Fpbi/lists"}