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is the README for fwdpy11_, which is a Python package for forward-time population genetic simulation.  It uses\nfwdpp_ as its C++ back-end.\n\n\nBuild status\n-----------------------\n\nMain:\n\n.. image:: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=main\n    :target: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=main\n\n.. image:: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=main\n    :target: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=main\n\nDevelopment: \n\n.. image:: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=dev\n    :target: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=dev\n\n.. image:: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=dev\n    :target: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=dev\n\nConda status\n-----------------------\n\n.. image:: https://anaconda.org/bioconda/fwdpy11/badges/version.svg   \n\t:target: https://anaconda.org/bioconda/fwdpy11\n\n.. image:: https://anaconda.org/bioconda/fwdpy11/badges/platforms.svg   \n        :target: https://anaconda.org/bioconda/fwdpy11\n\nMiscellaneous\n-----------------------\n\nPython code style:\n\n.. image:: https://img.shields.io/badge/code%20style-black-000000.svg\n    :target: https://github.com/psf/black\n\nFeatures\n-----------------------\n\n* Pickle-able population objects\n* Parallel computation via multiprocessing_ or concurrent.futures_.\n* Custom temporal samplers to analyze populations *during* a simulation may be written in pure Python.\n* Flexible interface for simulating models with multiple populations.\n\nDocumentation\n-----------------------\n\nThe manual can be found `here \u003chttps://molpopgen.github.io/fwdpy11\u003e`_.\n\nLicense\n-----------------------\n\nGPLv3 or later (See COPYING)\n\nSupported Python version\n-------------------------------------------------\n\nfwdpy11 is written for Python 3.\nWe will not modify the package to be compatible with Python 2.7.\n\n\nDependencies and installation\n---------------------------------\n\nThese topics are covered in the user manual:\n\n* People wishing to run `fwpdy11` should see `this section \u003chttps://molpopgen.github.io/fwdpy11/pages/userenv.html\u003e`_.\n* Those who need to build the package from source should look `the developer's guide \u003chttps://molpopgen.github.io/fwdpy11/misc/developersguide.html\u003e`_.\n\nCitation\n----------------------------------\n\nIf you use this software for research, please cite the following publications:\n\n* Kevin R Thornton. Polygenic adaptation to an environmental shift: temporal dynamics of variation under gaussian stabilizing selection and additive effects on a single trait. Genetics, 213(4):1513–1530, December 2019.\n\n* Kevin R Thornton. A c++ template library for efficient forward-time population genetic simulation of large populations. Genetics, 198(1):157–166, September 2014.\n\nThis software was developed for the first paper.\nThe second paper describes a key part of this software's back end.\n\n\n.. _fwdpy11: https://github.com/molpopgen/fwdpy11\n.. _fwdpp: https://github.com/molpopgen/fwdpp\n.. _GSL: http://gnu.org/software/gsl\n.. _pybind11: https://github.com/pybind/pybind11\n.. _multiprocessing: https://docs.python.org/3/library/multiprocessing.html\n.. _concurrent.futures: https://docs.python.org/3/library/concurrent.futures.html\n.. _bioconda: https://bioconda.github.io/\n.. _release: https://github.com/molpopgen/fwdpy11/releases\n.. _cmake: https://cmake.org\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmolpopgen%2Ffwdpy11","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmolpopgen%2Ffwdpy11","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmolpopgen%2Ffwdpy11/lists"}