{"id":18399773,"url":"https://github.com/mrc-ide/shiny90","last_synced_at":"2025-04-12T16:24:34.357Z","repository":{"id":33557102,"uuid":"146604625","full_name":"mrc-ide/shiny90","owner":"mrc-ide","description":"Shiny tool for the first 90 HIV model (https://github.com/mrc-ide/first90)","archived":false,"fork":false,"pushed_at":"2023-05-09T08:50:43.000Z","size":547,"stargazers_count":2,"open_issues_count":1,"forks_count":0,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-02-16T03:16:31.495Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://shiny90.unaids.org/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/mrc-ide.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2018-08-29T13:32:42.000Z","updated_at":"2023-01-26T08:30:45.000Z","dependencies_parsed_at":"2023-02-14T15:16:12.333Z","dependency_job_id":"78159470-ed6c-4aba-94d9-6c7b00f7ecbb","html_url":"https://github.com/mrc-ide/shiny90","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mrc-ide%2Fshiny90","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mrc-ide%2Fshiny90/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mrc-ide%2Fshiny90/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mrc-ide%2Fshiny90/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/mrc-ide","download_url":"https://codeload.github.com/mrc-ide/shiny90/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248594828,"owners_count":21130428,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-06T02:28:28.054Z","updated_at":"2025-04-12T16:24:34.311Z","avatar_url":"https://github.com/mrc-ide.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# shiny90\nShiny tool for the first 90 HIV model (https://github.com/mrc-ide/first90)\n\n[![Travis-CI Build Status](https://travis-ci.com/mrc-ide/shiny90.svg?branch=master)](https://travis-ci.com/mrc-ide/shiny90)\n\n## Prerequisites\n1. Make sure you have R installed and added to your path\n2. If you are on Windows you will also need Rtools to install dependencies from Github:\nhttp://stat.sfu.ca/statgen/resources/r-tools-for-building-packages-on-windows.html\n\n## Install dependencies\nRun\n\n```\n./scripts/bootstrap.R\n```\n\nto install R dependencies.\n\n## Run app\nTo run the app: `./run.R`\n\nTo run the app with an inaccurate model for quick testing:\n\n```\nSHINY90_TEST_MODE=TRUE ./run.R\n```\n\n## Tests\n\nFor unit tests:\n```\n./scripts/bootstrap-dev.R\n./scripts/unittest\n```\n\nFor Selenium tests:\n```\nsudo ./scripts/install_geckodriver.sh\n./scripts/test\n```\n\nThey should also run at https://travis-ci.com/mrc-ide/shiny90\n\n# Sample files\nAvailable on SharePoint [here](https://imperiallondon-my.sharepoint.com/:f:/r/personal/epidem_ic_ac_uk/Documents/UNAIDS%20Ref%20Group%20Shared%20Drive/Ref%20Group%20Meetings/Meetings%202018/first%2090%20workshop%20-%20Wisbech%20August%202018?csf=1\u0026e=MFospr)\n\nOr if you access to the private repo, you can get at sample files via the submodule:\n\n```\ngit submodule init\ngit submodule update\nls sample_files\n```\n\n# Build a USB stick\n**You must be on the Imperial Dide network for this to work**\n```\n./scripts/build_usb.sh\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmrc-ide%2Fshiny90","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmrc-ide%2Fshiny90","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmrc-ide%2Fshiny90/lists"}