{"id":24182998,"url":"https://github.com/ms609/congrevelamsdell2016","last_synced_at":"2026-05-31T01:31:34.622Z","repository":{"id":56936615,"uuid":"158200034","full_name":"ms609/CongreveLamsdell2016","owner":"ms609","description":"Data generated from Congreve and Lamsdell (2016).  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R. (2019), Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets, _Biological Letters_, 15:20180632, \ndoi:[10.1098/rsbl.2018.0632](https://doi.org/10.1098/rsbl.2018.0632).\n\nIt incorporates data from:\n\n- Congreve, C. R., and J. C. Lamsdell. 2016. Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices. _Palaeontology_, 59:447–462. doi:[10.1111/pala.12236](https://dx.doi.org/10.1111/pala.12236).\n\n- Congreve, C. R., and J. C. Lamsdell. 2016. Data from: Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices. _Dryad Digital Repository_, doi:[10.5061/dryad.7dq0j](https://dx.doi.org/10.5061/dryad.7dq0j).\n\nSome of these data are used in the [`Quartet`](https://ms609.github.io/Quartet/) package.\n\nEquivalent data and analyses from data simulated by O'Reilly _et al._ (2016) \nare available at [ms609.github.io/OReillyEtAl2016](https://ms609.github.io/OReillyEtAl2016/).\n\n## Installation\n## \nInstall and load the library from CRAN as follows:\n\n```\ninstall.packages('CongreveLamsdell2016')\nlibrary('CongreveLamsdell2016')\n```\n\n\u003c!--You can install the development version with:\n`devtools::install_github('ms609/CongreveLamsdell2016')`.--\u003e\n\n\n## Documentation\n\nThe package includes documentation and visualizations of its results:\n\n* R Package manual: [PDF](https://ms609.github.io/CongreveLamsdell2016/CongreveLamsdell2016_1.0.2.pdf)\n\n* How to conduct the analyses:\n[HTML](https://ms609.github.io/CongreveLamsdell2016/Conduct-analyses.html) | \n[PDF](https://ms609.github.io/CongreveLamsdell2016/Conduct-analyses.pdf)\n\n* Node support comparisons:\n[HTML](https://ms609.github.io/CongreveLamsdell2016/Compare-node-supports.html) | \n[PDF](https://ms609.github.io/CongreveLamsdell2016/Compare-node-supports.pdf)\n\n* Comparisons of phylogenetic methods:\n[HTML](https://ms609.github.io/CongreveLamsdell2016/Compare-methods.html) | \n[PDF](https://ms609.github.io/CongreveLamsdell2016/Compare-methods.pdf)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fms609%2Fcongrevelamsdell2016","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fms609%2Fcongrevelamsdell2016","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fms609%2Fcongrevelamsdell2016/lists"}