{"id":19749462,"url":"https://github.com/mskcc/smile-server","last_synced_at":"2026-05-29T02:04:18.253Z","repository":{"id":37961054,"uuid":"312355782","full_name":"mskcc/smile-server","owner":"mskcc","description":null,"archived":false,"fork":false,"pushed_at":"2026-04-03T16:20:24.000Z","size":1028,"stargazers_count":2,"open_issues_count":94,"forks_count":4,"subscribers_count":2,"default_branch":"master","last_synced_at":"2026-04-03T19:33:39.029Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Java","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/mskcc.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2020-11-12T17:58:32.000Z","updated_at":"2026-04-03T16:02:27.000Z","dependencies_parsed_at":"2026-01-30T00:02:31.867Z","dependency_job_id":null,"html_url":"https://github.com/mskcc/smile-server","commit_stats":null,"previous_names":[],"tags_count":137,"template":false,"template_full_name":null,"purl":"pkg:github/mskcc/smile-server","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mskcc%2Fsmile-server","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mskcc%2Fsmile-server/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mskcc%2Fsmile-server/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mskcc%2Fsmile-server/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/mskcc","download_url":"https://codeload.github.com/mskcc/smile-server/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mskcc%2Fsmile-server/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":33633468,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-05-26T15:22:16.424Z","status":"online","status_checked_at":"2026-05-29T02:00:06.066Z","response_time":107,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-12T02:26:35.901Z","updated_at":"2026-05-29T02:04:18.248Z","avatar_url":"https://github.com/mskcc.png","language":"Java","funding_links":[],"categories":[],"sub_categories":[],"readme":"# CMO SMILE Server 🔍\n\nSMILE is a distributed microservices system. It receives messages from LIMS when a request is marked delivered. This message is processed and persisted to NEO4J. Any new message is then published to downstream subscribers.\n\n## Run\n\n### Custom properties\n\nMake an `application.properties` based on [application.properties.EXAMPLE](src/main/resources/application.properties.EXAMPLE).\n\nAll properties are required with the exception of some NATS connection-specific properties. The following are only required if `nats.tls_channel` is set to `true`:\n\n- `nats.keystore_path` : path to client keystore\n- `nats.truststore_path` : path to client truststore\n- `nats.key_password` : keystore password\n- `nats.store_password` : truststore password\n\n### Locally\n\n**Requirements:**\n- maven 3.8.8\n- java 21\n\nAdd `application.properties` to the local application resources: `src/main/resources`\n\nBuild with\n\n```\nmvn clean install\n```\n\nRun with\n\n```\njava --add-opens=java.base/java.nio=org.apache.arrow.memory.core,ALL-UNNAMED -jar server/target/smile_server.jar\n```\n\n### With Docker\n\n**Requirements**\n- docker\n\nBuild image with Docker\n\n```\ndocker build -t \u003crepo\u003e/\u003ctag\u003e:\u003cversion\u003e .\n```\n\nor with Apple silicon\n\n```\ndocker build --platform linux/amd64 -t \u003crepo\u003e/\u003ctag\u003e:\u003cversion\u003e .\n```\n\nPush image to DockerHub\n\n```\ndocker push \u003crepo\u003e/\u003ctag\u003e:\u003cversion\u003e\n```\n\nIf the Docker image is built with the properties baked in then simply run with:\n\n\n```\ndocker run --name smile-server \u003crepo\u003e/\u003ctag\u003e:\u003cversion\u003e \\\n\t--add-opens=java.base/java.nio=org.apache.arrow.memory.core,ALL-UNNAMED -jar /smile-server/smile_server.jar\n```\n\nOtherwise use a bind mount to make the local files available to the Docker image and add  `--spring.config.location` to the java arg\n\n```\ndocker run --mount type=bind,source=\u003clocal path to properties files\u003e,target=/smile-server/src/main/resources \\\n\t--name smile-server \u003crepo\u003e/\u003ctag\u003e:\u003cversion\u003e \\\n\t--add-opens=java.base/java.nio=org.apache.arrow.memory.core,ALL-UNNAMED -jar /smile-server/smile_server.jar \\\n\t--spring.config.location=/cmo-metadb/src/main/resources/application.properties\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmskcc%2Fsmile-server","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmskcc%2Fsmile-server","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmskcc%2Fsmile-server/lists"}