{"id":15893535,"url":"https://github.com/multimeric/awsnextflowbug","last_synced_at":"2026-01-11T04:00:57.895Z","repository":{"id":85377145,"uuid":"407052789","full_name":"multimeric/AwsNextflowBug","owner":"multimeric","description":null,"archived":false,"fork":false,"pushed_at":"2023-03-24T10:51:02.000Z","size":1,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-04-02T18:15:22.284Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Nextflow","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/multimeric.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2021-09-16T06:44:58.000Z","updated_at":"2021-09-16T06:45:32.000Z","dependencies_parsed_at":null,"dependency_job_id":"71ac605a-99e6-41b6-891b-110acc59a5d7","html_url":"https://github.com/multimeric/AwsNextflowBug","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/multimeric/AwsNextflowBug","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/multimeric%2FAwsNextflowBug","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/multimeric%2FAwsNextflowBug/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/multimeric%2FAwsNextflowBug/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/multimeric%2FAwsNextflowBug/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/multimeric","download_url":"https://codeload.github.com/multimeric/AwsNextflowBug/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/multimeric%2FAwsNextflowBug/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":28280274,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-01-11T03:48:11.750Z","status":"ssl_error","status_checked_at":"2026-01-11T03:48:02.765Z","response_time":60,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-10-06T08:11:40.809Z","updated_at":"2026-01-11T04:00:57.457Z","avatar_url":"https://github.com/multimeric.png","language":"Nextflow","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Nextflow AWS Bug\n\n* First, ensure you have an AWS account configured as explained [here](https://www.nextflow.io/docs/latest/awscloud.html#)\n* Then, set the queue ARN and region in the config file\n* Finally, run `nextflow run bug.nf -bucket-dir some_bucket`\n* After some time you should get the error: \"Process `spades` terminated for an unknown reason -- Likely it has been terminated by the external system\"\n* At this point, run `aws batch list-jobs --job-queue MY-QUEUE-ARN --job-status FAILED --output yaml`, and when you find the job that most recently failed, it should say something like \"Process `spades` terminated for an unknown reason -- Likely it has been terminated by the external system\"\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmultimeric%2Fawsnextflowbug","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmultimeric%2Fawsnextflowbug","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmultimeric%2Fawsnextflowbug/lists"}