{"id":23735384,"url":"https://github.com/murraylab/braintrips","last_synced_at":"2026-02-25T20:30:17.972Z","repository":{"id":102989080,"uuid":"373502199","full_name":"murraylab/braintrips","owner":"murraylab","description":"BRainwide Activity Induced by Neuromodulation via TRanscriptomics-Informed Pharmacological Simulation","archived":false,"fork":false,"pushed_at":"2021-06-13T19:52:11.000Z","size":591,"stargazers_count":4,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"main","last_synced_at":"2024-12-31T06:14:58.139Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/murraylab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2021-06-03T12:38:48.000Z","updated_at":"2023-03-04T20:01:49.000Z","dependencies_parsed_at":null,"dependency_job_id":"c0966416-0b5a-404c-a280-8d8a153380bc","html_url":"https://github.com/murraylab/braintrips","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/murraylab%2Fbraintrips","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/murraylab%2Fbraintrips/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/murraylab%2Fbraintrips/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/murraylab%2Fbraintrips/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/murraylab","download_url":"https://codeload.github.com/murraylab/braintrips/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":239866460,"owners_count":19710189,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-31T06:15:02.905Z","updated_at":"2026-02-25T20:30:17.899Z","avatar_url":"https://github.com/murraylab.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"BRAINTRIPS\n==========\nBRainwide Activity Induced by Neuromodulation via TRanscriptomics-Informed Pharmacological Simulation\n\nDependencies\n============\nRequires Python 3. [One of the scripts](https://github.com/murraylab/braintrips/blob/main/study/scripts/Generate_Map_Image.py) demonstrates how to save brain map images using \n[wbplot](https://github.com/jbburt/wbplot), and wbplot is NOT (as of Jun 13, 2021) \ncompatible with Windows (due to the fact that some functionality in Connectome\nWorkbench is not currently supported on the Windows operating system). \n\nDocumentation\n=============\nSee the [scripts](https://github.com/murraylab/braintrips/tree/main/study) for a few examples of how to use the modeling code in this package.\n\nAdditional data associated with this study can be downloaded from [BALSA](https://balsa.wustl.edu/study/show/5XMxv).\n\nReference\n---------\nPlease include the following citation if you use any of this code in your research: \n- Burt, J. B., Preller, K. H., Demirtas, M., Ji, J. L., Krystal, J. H., Vollenweider, F. X., ... \u0026 Murray, J. D. (2021). Transcriptomics-informed large-scale cortical model captures topography of pharmacological neuroimaging effects of LSD. *bioRxiv*.\n\n(If I forget to update this with the eLife reference and the study has since been published, please use that reference instead!)","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmurraylab%2Fbraintrips","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fmurraylab%2Fbraintrips","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fmurraylab%2Fbraintrips/lists"}