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For linux-based OS, type the following in the terminal:\n```\nsudo pip install cellbrowser=0.5.6\n```\n## Run:\n\n```\nlibrary(SeuratV3Wizard)\nSeuratV3Wizard()\n```\nThis will run on http://0.0.0.0:1234/ by default\n***\n\nTo run on specific ip/port:\n\n```\nip = '127.0.0.1'\nportNumber = 5555\nSeuratV3Wizard(ip,portNumber)\n```\nThis will run on http://127.0.0.1:5555/\n\n## Screenshots:\n![alt text](screenshots/screenshot-input.png \"Input Data\")\n\n![alt text](screenshots/screenshot-vln.png \"Vln Plots\")\n\n![alt text](screenshots/screenshot-tsne.png \"TSNE\")\n\n![alt text](screenshots/screenshot-markers.png \"Cluster Biomarkers\")\n\n## Acknowledgements:\n\n- Rahul Satija, Andrew Butler and Paul Hoffman (2017). Seurat: Tools for Single Cell Genomics. R package version 2.2.1\\. [https://CRAN.R-project.org/package=Seurat](https://CRAN.R-project.org/package=Seurat)\n\n- [Satija Lab](http://satijalab.org/seurat/)\n\n- [Christoph Hafemeister, Rahul Satija (2019). Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression](https://github.com/ChristophH/sctransform)\n\n- [UCSC Single Cell Browser](https://github.com/maximilianh/cellBrowser)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnasqar%2Fseuratv3wizard","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fnasqar%2Fseuratv3wizard","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnasqar%2Fseuratv3wizard/lists"}