{"id":23085798,"url":"https://github.com/neurodatawithoutborders/nwb-tools","last_synced_at":"2025-04-03T15:29:13.777Z","repository":{"id":87540923,"uuid":"372995742","full_name":"NeurodataWithoutBorders/nwb-tools","owner":"NeurodataWithoutBorders","description":"Command-line tools for interacting with NWB files.","archived":false,"fork":false,"pushed_at":"2021-09-23T19:10:24.000Z","size":18,"stargazers_count":0,"open_issues_count":2,"forks_count":0,"subscribers_count":8,"default_branch":"main","last_synced_at":"2025-02-09T04:22:47.692Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/NeurodataWithoutBorders.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"license.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2021-06-02T00:34:58.000Z","updated_at":"2021-09-23T19:10:27.000Z","dependencies_parsed_at":null,"dependency_job_id":"daadfd41-18f7-49d8-a77e-97769adf42d0","html_url":"https://github.com/NeurodataWithoutBorders/nwb-tools","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NeurodataWithoutBorders%2Fnwb-tools","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NeurodataWithoutBorders%2Fnwb-tools/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NeurodataWithoutBorders%2Fnwb-tools/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NeurodataWithoutBorders%2Fnwb-tools/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/NeurodataWithoutBorders","download_url":"https://codeload.github.com/NeurodataWithoutBorders/nwb-tools/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247027275,"owners_count":20871508,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-16T18:10:59.408Z","updated_at":"2025-04-03T15:29:13.754Z","avatar_url":"https://github.com/NeurodataWithoutBorders.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# nwbtools\n\nThese tools are NOT ready for production use. There is no guarantee of support for these tools.\n\n## nwbls\nTool to print the contents of an NWB file\n\nFor example:\n```bash\n$ nwbls nwbfile.nwb\n- acquisition: Group (1 members)\n  - TimeSeries: Group (2 members)\n    - data: Dataset (shape: (10000, 10), dtype: int32)\n      \u003e conversion: 1.0\n      \u003e resolution: -1.0\n      \u003e unit: unit\n    - starting_time: Dataset (shape: (), dtype: float64)\n      \u003e rate: 1.0\n      \u003e unit: seconds\n    \u003e comments: no comments\n    \u003e description: no description\n    \u003e namespace: core\n    \u003e neurodata_type: TimeSeries\n    \u003e object_id: 5f9d991c-e106-4df3-bf8f-ce8fa174d52f\n- analysis: Group (0 members)\n- file_create_date: Dataset (shape: (1,), dtype: object)\n- general: Group (0 members)\n- identifier: Dataset (shape: (), dtype: object)\n- processing: Group (0 members)\n- session_description: Dataset (shape: (), dtype: object)\n- session_start_time: Dataset (shape: (), dtype: object)\n- specifications: Group (3 members)\n  - core: Group (1 members)\n    - 2.3.0: Group (13 members)\n      - namespace: Dataset (shape: (), dtype: object)\n      - nwb.base: Dataset (shape: (), dtype: object)\n      - nwb.behavior: Dataset (shape: (), dtype: object)\n      - nwb.device: Dataset (shape: (), dtype: object)\n      - nwb.ecephys: Dataset (shape: (), dtype: object)\n      - nwb.epoch: Dataset (shape: (), dtype: object)\n      - nwb.file: Dataset (shape: (), dtype: object)\n      - nwb.icephys: Dataset (shape: (), dtype: object)\n      - nwb.image: Dataset (shape: (), dtype: object)\n      - nwb.misc: Dataset (shape: (), dtype: object)\n      - nwb.ogen: Dataset (shape: (), dtype: object)\n      - nwb.ophys: Dataset (shape: (), dtype: object)\n      - nwb.retinotopy: Dataset (shape: (), dtype: object)\n  - hdmf-common: Group (1 members)\n    - 1.5.0: Group (4 members)\n      - base: Dataset (shape: (), dtype: object)\n      - namespace: Dataset (shape: (), dtype: object)\n      - sparse: Dataset (shape: (), dtype: object)\n      - table: Dataset (shape: (), dtype: object)\n  - hdmf-experimental: Group (1 members)\n    - 0.1.0: Group (3 members)\n      - experimental: Dataset (shape: (), dtype: object)\n      - namespace: Dataset (shape: (), dtype: object)\n      - resources: Dataset (shape: (), dtype: object)\n- stimulus: Group (2 members)\n  - presentation: Group (0 members)\n  - templates: Group (0 members)\n- timestamps_reference_time: Dataset (shape: (), dtype: object)\n\u003e .specloc: Reference to /specifications\n\u003e namespace: core\n\u003e neurodata_type: NWBFile\n\u003e nwb_version: 2.3.0\n\u003e object_id: 41284c57-659a-442f-aad8-a9f920a771a0\n```\n\n## nwbtrim\nTool to reduce the size of an NWB file for debugging and sharing\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fneurodatawithoutborders%2Fnwb-tools","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fneurodatawithoutborders%2Fnwb-tools","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fneurodatawithoutborders%2Fnwb-tools/lists"}