{"id":20153486,"url":"https://github.com/nextflow-io/nf-hack17","last_synced_at":"2025-05-06T22:31:07.301Z","repository":{"id":68691258,"uuid":"96760893","full_name":"nextflow-io/nf-hack17","owner":"nextflow-io","description":"Nextflow hackathon 2017 projects ","archived":true,"fork":false,"pushed_at":"2017-09-28T15:05:09.000Z","size":26306,"stargazers_count":10,"open_issues_count":11,"forks_count":2,"subscribers_count":9,"default_branch":"master","last_synced_at":"2025-03-07T07:12:03.287Z","etag":null,"topics":["hackathon","nextflow"],"latest_commit_sha":null,"homepage":null,"language":"Shell","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/nextflow-io.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2017-07-10T09:38:54.000Z","updated_at":"2025-02-13T16:51:42.000Z","dependencies_parsed_at":null,"dependency_job_id":"cec2d54d-d7a0-4c86-afce-f0c3521af7ed","html_url":"https://github.com/nextflow-io/nf-hack17","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nextflow-io%2Fnf-hack17","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nextflow-io%2Fnf-hack17/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nextflow-io%2Fnf-hack17/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nextflow-io%2Fnf-hack17/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/nextflow-io","download_url":"https://codeload.github.com/nextflow-io/nf-hack17/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":252778955,"owners_count":21802858,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["hackathon","nextflow"],"created_at":"2024-11-13T23:19:12.658Z","updated_at":"2025-05-06T22:31:07.292Z","avatar_url":"https://github.com/nextflow-io.png","language":"Shell","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Nextflow hackathon 2017 projects \n\nThis repository lists the project ideas and the material used during the hackathon organised \nin the context of the [Nextflow workshop](https://www.nextflow.io/blog/2017/nextflow-workshop.html) \nthat will take on 14-15 September 2017 in Barcelona. \n\n### Location \n\n[PRBB building](https://www.google.es/maps/place/CRG/@41.3853788,2.191863,17z/data=!3m1!4b1!4m5!3m4!1s0x12a4a305ffd98f7b:0xd9cd1df01bab41bc!8m2!3d41.3853788!4d2.1940517?hl=en), Charles Darwin room, ground floor (you will need an ID card to enter in the building).  \n\n### Schedule \n\nThe workshop schedule is available [here](schedule.md).\n\n### Event chat\n\nWe will use the following Gitter [channel](https://gitter.im/nextflow-io/hack17) during the workshop activities. Feel free to register and use it for any question about logistic, problems, doubts during the hackathon, etc. \n\n### Hackathon \n\nProject ideas are listed in the [issues page](https://github.com/nextflow-io/hack17/issues).\n\nFeel free to join one of the listed project or create a new one if you have a specific idea on which you would like to work. \n\nWe also encourage you to create a separate GitHub repository to keep track your project files and link it to the relative [project idea](https://github.com/nextflow-io/hack17/issues) in the above link. This will allow us to share and follow-up the hackathon achievement. \n\n### Tutorial \n\nThe Nextflow tutorial is available at [this reporitory](https://github.com/nextflow-io/hack17-tutorial).\n\nTutorial participants are encouraged to implement the Variant Calling pipeline described in [this tutorial](https://nextflow-io.github.io/hack17-varcall/) in the second day. \n\n### Slides\n\nYou can find below the link to the speaker slides: \n\n* Frédéric Lemoine - [Large scale benchmarking of Phylogenetic bootstrap methods](slides/Frederic-Lemoine.pdf)\n* Hugues Fontenelle - [Medical Genetics at Oslo University Hospital](slides/hugues-fontenelle.pdf)\n* Jordi Rambla - [Standardizing life sciences datasets to improve reproducibility in the EOSC](slides/Jordi-Rambla.pdf)\n* Luca Cozzuto - [From zero to Nextflow](https://www.slideshare.net/lucacozzuto/from-zero-to-nextflow-2017)\n* Matthieu Foll - [Computational workflows for omics analyses at the IARC](https://www.slideshare.net/MatthieuFoll/computational-workflows-for-omics-analyses-at-the-iarc) \n* Paolo Di Tommaso - [Lessons learned and new challenges](https://speakerdeck.com/pditommaso/nextflow-workshop-17-lessons-learned-and-new-challenges)\n* Phil Ewels - [Standardising Swedish genomics analyses using Nextflow](https://www.slideshare.net/tallphil/standardising-swedish-genomics-analyses-using-nextflow/1)\n* Scott Hazelhurst - [Building pipelines to support African bioinformatics](slides/Scott-Hazelhurst.pdf)\n* Tim Dudgeon - [ Nextflow for chemistry - crossing the divide](slides/Tim-Dudgeon.pdf)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnextflow-io%2Fnf-hack17","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fnextflow-io%2Fnf-hack17","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnextflow-io%2Fnf-hack17/lists"}