{"id":25081756,"url":"https://github.com/nlesc/litstudy","last_synced_at":"2025-04-06T07:14:18.090Z","repository":{"id":39794500,"uuid":"206312286","full_name":"NLeSC/litstudy","owner":"NLeSC","description":"LitStudy: Using the power of Python to automate scientific literature analysis from the comfort of a Jupyter notebook","archived":false,"fork":false,"pushed_at":"2024-04-22T16:44:59.000Z","size":18908,"stargazers_count":133,"open_issues_count":26,"forks_count":42,"subscribers_count":7,"default_branch":"master","last_synced_at":"2024-04-24T04:12:48.259Z","etag":null,"topics":["bibliographics","bibliometric-analysis","bibliometric-visualization","bibliometrics","jupyter","literature-review","literature-review-tool","literature-search","python","scientometrics","systematic-literature-reviews","systematic-reviews"],"latest_commit_sha":null,"homepage":"https://nlesc.github.io/litstudy/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/NLeSC.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-09-04T12:19:05.000Z","updated_at":"2024-07-31T17:05:15.832Z","dependencies_parsed_at":"2023-01-30T07:16:02.399Z","dependency_job_id":"3d7d28f5-16fd-47d0-ba97-679bf42d6c5e","html_url":"https://github.com/NLeSC/litstudy","commit_stats":{"total_commits":243,"total_committers":9,"mean_commits":27.0,"dds":0.2962962962962963,"last_synced_commit":"91342802223038362bda5407d1c1bd3b6d849bda"},"previous_names":[],"tags_count":9,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NLeSC%2Flitstudy","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NLeSC%2Flitstudy/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NLeSC%2Flitstudy/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NLeSC%2Flitstudy/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/NLeSC","download_url":"https://codeload.github.com/NLeSC/litstudy/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247445681,"owners_count":20939961,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bibliographics","bibliometric-analysis","bibliometric-visualization","bibliometrics","jupyter","literature-review","literature-review-tool","literature-search","python","scientometrics","systematic-literature-reviews","systematic-reviews"],"created_at":"2025-02-07T05:18:21.547Z","updated_at":"2025-04-06T07:14:18.066Z","avatar_url":"https://github.com/NLeSC.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# LitStudy\n\n![Logo](https://raw.githubusercontent.com/nlesc/litstudy/master/docs/logo.png#gh-light-mode-only)\n\n[![github](https://img.shields.io/badge/github-repo-000.svg?logo=github\u0026labelColor=gray\u0026color=blue)](https://github.com/NLeSC/litstudy/)\n[![DOI](https://zenodo.org/badge/206312286.svg)](https://zenodo.org/badge/latestdoi/206312286)\n[![License](https://img.shields.io/github/license/nlesc/litstudy)](https://github.com/NLeSC/litstudy/blob/master/LICENSE)\n[![Version](https://img.shields.io/pypi/v/litstudy)](https://pypi.org/project/litstudy/)\n[![Build and Test](https://github.com/NLeSC/litstudy/actions/workflows/python-app.yml/badge.svg)](https://github.com/NLeSC/litstudy/actions/)\n\nLitStudy is a Python package that enables analysis of scientific literature from the comfort of a Jupyter notebook. It provides the ability to select scientific publications and study their metadata through the use of visualizations, network analysis, and natural language processing.\n\nIn essence, this package offers five main features:\n\n* Extract metadata from scientific documents sourced from various locations. The data is presented in a standardized interface, allowing for the combination of data from different sources.\n* Filter, select, deduplicate, and annotate collections of documents.\n* Compute and plot general statistics for document sets, such as statistics on authors, venues, and publication years.\n* Generate and plot various bibliographic networks as interactive visualizations.\n* Topic discovery using natural language processing (NLP) allows for the automatic discovery of popular topics.\n\n## Frequently Asked Questions\n\nIf you have any questions or run into an error, see the [_Frequently Asked Questions_](https://nlesc.github.io/litstudy/faq.html) section of the [documentation](https://nlesc.github.io/litstudy/).\nIf your question or error is not on the list, please check the [GitHub issue tracker](https://github.com/NLeSC/litstudy/issues) for a similar issue or\ncreate a [new issue](https://github.com/NLeSC/litstudy/issues/new).\n\n## Supported Source\n\nLitStudy supports the following data sources. The table below lists which metadata is fully (✓) or partially (*) provided by each source.\n\n| Name            | Title | Authors | Venue | Abstract | Citations      | References |\n|-----------------|-------|---------|-------|----------|----------------|------------|\n| [Scopus]          | ✓     | ✓       | ✓     | ✓        | ✓              | ✓\n| [SemanticScholar] | ✓     | ✓       | ✓     | ✓        | * \u003csup\u003e(count only)\u003c/sup\u003e | ✓\n| [CrossRef]        | ✓     | ✓       | ✓     | ✓        | * \u003csup\u003e(count only)\u003c/sup\u003e | ✓\n| [DBLP]            | ✓     | ✓       | ✓     |          |                |\n| [arXiv]           | ✓     | ✓       |       | ✓        |                |\n| [IEEE Xplore]     | ✓     | ✓       | ✓     | ✓        | * \u003csup\u003e(count only)\u003c/sup\u003e |\n| [Springer Link]   | ✓     | ✓       | ✓     | ✓        | * \u003csup\u003e(count only)\u003c/sup\u003e |\n| CSV file        | ✓     | ✓       | ✓     | ✓        |                |\n| bibtex file     | ✓     | ✓       | ✓     | ✓        |                |\n| RIS file        | ✓     | ✓       | ✓     | ✓        |                |\n\n[Scopus]: http://scopus.com/\n[SemanticScholar]: https://www.semanticscholar.org/\n[CrossRef]: https://www.crossref.org/\n[DBLP]: https://dblp.org/\n[arXiv]: https://arxiv.org/\n[IEEE Xplore]: https://ieeexplore.ieee.org/\n[Springer Link]: https://link.springer.com/\n\n## Example\n\nAn example notebook is available in `notebooks/example.ipynb` and [here](https://nlesc.github.io/litstudy/example.html).\n\n[![Example notebook](https://raw.githubusercontent.com/NLeSC/litstudy/master/docs/images/notebook.png)](https://github.com/NLeSC/litstudy/blob/master/notebooks/example.ipynb)\n\n## Installation Guide\n\nLitStudy is available on PyPI!\nFull installation guide is available [here](https://nlesc.github.io/litstudy/installation.html).\n\n```bash\npip install litstudy\n```\n\nOr install the latest development version directly from GitHub:\n\n```bash\npip install git+https://github.com/NLeSC/litstudy\n```\n\n## Documentation\n\nDocumentation is available [here](https://nlesc.github.io/litstudy/).\n\n## Requirements\n\nThe package has been tested for Python 3.7. Required packages are available in `requirements.txt`.\n\n`litstudy` supports several data sources.\nSome of these sources (such as semantic Scholar, CrossRef, and arXiv) are openly available.\nHowever to access the Scopus API, you (or your institute) requires a Scopus subscription and you need to request an Elsevier Developer API key (see [Elsevier Developers](https://dev.elsevier.com/index.jsp)).\nFor more information, see the [guide](https://pybliometrics.readthedocs.io/en/stable/access.html) by `pybliometrics`.\n\n## License\n\nApache 2.0. See [LICENSE](https://github.com/NLeSC/litstudy/blob/master/LICENSE).\n\n## Change log\n\nSee [CHANGELOG.md](https://github.com/NLeSC/litstudy/blob/master/CHANGELOG.md).\n\n## Contributing\n\nSee [CONTRIBUTING.md](https://github.com/NLeSC/litstudy/blob/master/CONTRIBUTING.md).\n\n## Citation\n\nIf you use LitStudy in your work, please cite the following publication:\n\n\u003e S. Heldens, A. Sclocco, H. Dreuning, B. van Werkhoven, P. Hijma, J. Maassen \u0026 R.V. van Nieuwpoort (2022), \"litstudy: A Python package for literature reviews\", SoftwareX 20\n\nAs BibTeX:\n\n```Latex\n@article{litstudy,\n    title = {litstudy: A Python package for literature reviews},\n    journal = {SoftwareX},\n    volume = {20},\n    pages = {101207},\n    year = {2022},\n    issn = {2352-7110},\n    doi = {https://doi.org/10.1016/j.softx.2022.101207},\n    url = {https://www.sciencedirect.com/science/article/pii/S235271102200125X},\n    author = {S. Heldens and A. Sclocco and H. Dreuning and B. {van Werkhoven} and P. Hijma and J. Maassen and R. V. {van Nieuwpoort}},\n}\n```\n\n## Related work\n\nDon't forget to check out these other amazing software packages!\n\n* [ScientoPy](https://www.scientopy.com/): Open-source Python based scientometric analysis tool.\n* [pybliometrics](https://github.com/pybliometrics-dev/pybliometrics): API-Wrapper to access Scopus.\n* [ASReview](https://asreview.nl/): Active learning for systematic reviews.\n* [metaknowledge](https://github.com/UWNETLAB/metaknowledge): Python library for doing bibliometric and network analysis in science.\n* [tethne](https://github.com/diging/tethne): Python module for bibliographic network analysis.\n* [VOSviewer](https://www.vosviewer.com/): Software tool for constructing and visualizing bibliometric networks.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnlesc%2Flitstudy","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fnlesc%2Flitstudy","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnlesc%2Flitstudy/lists"}