{"id":29625159,"url":"https://github.com/novartis/knockofftools","last_synced_at":"2025-07-21T06:07:29.744Z","repository":{"id":207608543,"uuid":"706278474","full_name":"Novartis/knockofftools","owner":"Novartis","description":"An R-package containing a suite of knockoffs functions and methods from existing R-packages and the knockoffs literature. Some of the R functions are novel implementations of recent methods.","archived":false,"fork":false,"pushed_at":"2024-03-04T13:24:08.000Z","size":5000,"stargazers_count":1,"open_issues_count":1,"forks_count":1,"subscribers_count":3,"default_branch":"main","last_synced_at":"2024-10-22T08:04:56.747Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://opensource.nibr.com/knockofftools/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Novartis.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2023-10-17T16:23:35.000Z","updated_at":"2024-03-05T13:32:55.000Z","dependencies_parsed_at":"2024-01-11T21:05:13.997Z","dependency_job_id":null,"html_url":"https://github.com/Novartis/knockofftools","commit_stats":null,"previous_names":["novartis/knockofftools"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/Novartis/knockofftools","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Novartis%2Fknockofftools","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Novartis%2Fknockofftools/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Novartis%2Fknockofftools/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Novartis%2Fknockofftools/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Novartis","download_url":"https://codeload.github.com/Novartis/knockofftools/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Novartis%2Fknockofftools/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":266248501,"owners_count":23899056,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-07-21T06:07:29.152Z","updated_at":"2025-07-21T06:07:29.738Z","avatar_url":"https://github.com/Novartis.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"The `knockofftools` package\n====================\n\nA suite of knockoffs functions and methods from existing R-packages and papers. Some of the R functions are simple wrapper \nfunctions, while others are novel implementations of recent methods.\n\n## Invoking the R-package in development mode\n\nTo invoke the R-package in development mode: please clone the repository, set it as working directory of your R session, and run\n`devtools::load_all()`.\n\n\n## How to use knockofftools\n\nIn the vignette folder we provide various example use cases of the knockofftools. \n\n## References \nKnockoff tools is introduced in [Zimmermann et al. 2024)](https://ascpt.onlinelibrary.wiley.com/doi/full/10.1002/cpt.3211).\n\nFurthermore, details of the novel implemented methods can be found in the following papers:\n\n- Sparse sequential knockoffs in [Zimmermann et al. (2024)](https://ascpt.onlinelibrary.wiley.com/doi/full/10.1002/cpt.3211)\n- Sequential knockoffs in [Kormaksson et al. (2021)](https://onlinelibrary.wiley.com/doi/full/10.1002/sim.8955)\n- Predictive knockoffs in [Sechidis et al. (2021)](https://onlinelibrary.wiley.com/doi/full/10.1002/sim.9134)\n\nIf you make use of any of these, please cite the papers above.\n\n# Code authors\n\n- Matthias Kormaksson, matthias-1.kormaksson_ext@novartis.com\n- Konstantinos (Kostas) Sechidis, kostas.sechidis@novartis.com\n- Manuela Zimmermann, manuela.zimmermann@novartis.com\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnovartis%2Fknockofftools","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fnovartis%2Fknockofftools","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fnovartis%2Fknockofftools/lists"}