{"id":28205178,"url":"https://github.com/ome/omero-guide-r","last_synced_at":"2026-03-02T17:06:02.388Z","repository":{"id":37819111,"uuid":"203969794","full_name":"ome/omero-guide-r","owner":"ome","description":null,"archived":false,"fork":false,"pushed_at":"2023-05-10T12:15:33.000Z","size":2106,"stargazers_count":1,"open_issues_count":1,"forks_count":5,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-06-05T06:56:25.676Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-2-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ome.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2019-08-23T09:40:30.000Z","updated_at":"2023-05-25T21:20:57.000Z","dependencies_parsed_at":"2022-06-22T18:23:59.653Z","dependency_job_id":"ffd599ba-6aba-49a8-987d-45f1c3d228d5","html_url":"https://github.com/ome/omero-guide-r","commit_stats":{"total_commits":76,"total_committers":4,"mean_commits":19.0,"dds":"0.26315789473684215","last_synced_commit":"a770a1048469668b66f5bde686d5b6d84d021e6d"},"previous_names":[],"tags_count":1,"template":false,"template_full_name":"ome/guide-template","purl":"pkg:github/ome/omero-guide-r","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ome%2Fomero-guide-r","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ome%2Fomero-guide-r/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ome%2Fomero-guide-r/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ome%2Fomero-guide-r/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ome","download_url":"https://codeload.github.com/ome/omero-guide-r/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ome%2Fomero-guide-r/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":259748388,"owners_count":22905513,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-05-17T08:13:35.005Z","updated_at":"2025-10-28T10:41:49.690Z","avatar_url":"https://github.com/ome.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# User guides for the OMERO R API\n\n[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/ome/omero-guide-r/master?filepath=notebooks)\n[![Documentation Status](https://readthedocs.org/projects/omero-guide-r/badge/?version=latest)](https://omero-guides.readthedocs.io/en/latest/r/docs/index.html)\n[![Actions Status](https://github.com/ome/omero-guide-r/workflows/repo2docker/badge.svg)](https://github.com/ome/omero-guide-r/actions)\n\nThe documentation is deployed at [Use R API](https://omero-guides.readthedocs.io/en/latest/r/docs/index.html)\n\n\nThis guide demonstrates how to use the OMERO R API.\n\nTo run the notebooks, you can either [run on mybinder.org](https://mybinder.org/v2/gh/ome/omero-guide-r/master?filepath=notebooks) or build locally with [repo2docker](https://repo2docker.readthedocs.io/).\n\n\nTo build locally:\n\n * Install [Docker](https://www.docker.com/) if required\n * Create a virtual environment and install repo2docker from PyPI.\n * Clone this repository.\n * Run ``repo2docker``\n * Depending on the permissions, you might have to run the command as an admin\n\n```\npip install jupyter-repo2docker\ngit clone https://github.com/ome/omero-guide-r.git\ncd omero-guide-r\nrepo2docker .\n```\n\nSee also [setup.rst](https://github.com/ome/omero-guide-r/blob/master/docs/setup.rst)\n\n\nThis is a Sphinx based documentation. \nIf you are unfamiliar with Sphinx, we recommend that you first read \n[Getting Started with Sphinx](https://docs.readthedocs.io/en/stable/intro/getting-started-with-sphinx.html).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fome%2Fomero-guide-r","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fome%2Fomero-guide-r","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fome%2Fomero-guide-r/lists"}