{"id":38654446,"url":"https://github.com/openwashdata/breathablepitlat","last_synced_at":"2026-01-17T09:25:35.978Z","repository":{"id":259015763,"uuid":"818179304","full_name":"openwashdata/breathablepitlat","owner":"openwashdata","description":null,"archived":false,"fork":false,"pushed_at":"2024-10-23T08:13:49.000Z","size":2153,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-09-04T23:16:10.402Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://openwashdata.github.io/breathablepitlat/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc-by-4.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/openwashdata.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-06-21T09:13:14.000Z","updated_at":"2024-10-23T08:16:34.000Z","dependencies_parsed_at":"2025-04-12T08:01:53.911Z","dependency_job_id":null,"html_url":"https://github.com/openwashdata/breathablepitlat","commit_stats":null,"previous_names":["openwashdata/breathablepitlat"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/openwashdata/breathablepitlat","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openwashdata%2Fbreathablepitlat","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openwashdata%2Fbreathablepitlat/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openwashdata%2Fbreathablepitlat/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openwashdata%2Fbreathablepitlat/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/openwashdata","download_url":"https://codeload.github.com/openwashdata/breathablepitlat/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openwashdata%2Fbreathablepitlat/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":28505550,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-01-17T06:57:29.758Z","status":"ssl_error","status_checked_at":"2026-01-17T06:56:03.931Z","response_time":85,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2026-01-17T09:25:34.164Z","updated_at":"2026-01-17T09:25:35.930Z","avatar_url":"https://github.com/openwashdata.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"---\noutput: github_document\nalways_allow_html: true\neditor_options: \n  markdown: \n    wrap: 72\n  chunk_output_type: console\n---\n\n\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r, include = FALSE}\nknitr::opts_chunk$set(\n  collapse = TRUE,\n  comment = \"#\u003e\",\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\",\n  message = FALSE,\n  warning = FALSE,\n  fig.retina = 2,\n  fig.align = 'center'\n)\ndevtools::load_all()\n```\n\n# breathablepitlat\n\n\u003c!-- badges: start --\u003e\n\n[![License: CC BY\n4.0](https://img.shields.io/badge/License-CC_BY_4.0-lightgrey.svg)](https://creativecommons.org/licenses/by/4.0/)\n\n[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.13960699.svg)](https://zenodo.org/doi/10.5281/zenodo.13960699)\n\u003c!-- badges: end --\u003e\n\nThe goal of breathablepitlat is to demonstrate the transport of\ncontaminants from two pour flush, twin-pit latrines in which one pit is\nlined and one is unlined.\n\n## Installation\n\nYou can install the development version of breathablepitlat from\n[GitHub](https://github.com/) with:\n\n``` r\n# install.packages(\"devtools\")\ndevtools::install_github(\"openwashdata/breathablepitlat\")\n```\n\n```{r}\n## Run the following code in console if you don't have the packages\n## install.packages(c(\"dplyr\", \"knitr\", \"readr\", \"stringr\", \"gt\", \"kableExtra\"))\nlibrary(dplyr)\nlibrary(knitr)\nlibrary(readr)\nlibrary(stringr)\nlibrary(gt)\nlibrary(kableExtra)\n```\n\nAlternatively, you can download the individual datasets as a CSV or XLSX\nfile from the table below.\n\n```{r, echo=FALSE, message=FALSE, warning=FALSE}\n\nextdata_path \u003c- \"https://github.com/openwashdata/breathablepitlat/raw/main/inst/extdata/\"\n\nread_csv(\"data-raw/dictionary.csv\") |\u003e \n  distinct(file_name) |\u003e \n  dplyr::mutate(file_name = str_remove(file_name, \".rda\")) |\u003e \n  dplyr::rename(dataset = file_name) |\u003e \n  mutate(\n    CSV = paste0(\"[Download CSV](\", extdata_path, dataset, \".csv)\"),\n    XLSX = paste0(\"[Download XLSX](\", extdata_path, dataset, \".xlsx)\")\n  ) |\u003e \n  knitr::kable()\n\n```\n\n## Data\n\nThe package provides access to one dataset `breathablepitlat`.\n\n```{r}\nlibrary(breathablepitlat)\n```\n\n### breathablepitlat\n\nThe dataset `breathablepitlat` contains data about ... It has\n`r nrow(breathablepitlat)` observations and `r ncol(breathablepitlat)`\nvariables\n\n```{r}\nbreathablepitlat |\u003e \n  head(3) |\u003e \n  gt::gt() |\u003e\n  gt::as_raw_html()\n```\n\nFor an overview of the variable names, see the following table.\n\n```{r echo=FALSE, message=FALSE, warning=FALSE}\nreadr::read_csv(\"data-raw/dictionary.csv\") |\u003e\n  dplyr::filter(file_name == \"breathablepitlat.rda\") |\u003e\n  dplyr::select(variable_name:description) |\u003e \n  knitr::kable() |\u003e \n  kableExtra::kable_styling(\"striped\") |\u003e \n  kableExtra::scroll_box(height = \"200px\")\n```\n\n## Example\n\nGeographical location of the study site. The village locates in the\ndelta area adjacent to the Ganga River along the border of Fatehpur\nDistrict, Uttar Pradesh province, India.\n\n![](man/figures/Figure1.png)\n\n```{r}\nlibrary(breathablepitlat)\nlibrary(tidyverse)\n\nmean_location \u003c- breathablepitlat |\u003e \n  filter(!str_detect(location, \"ined\")) |\u003e \n  filter(num_test=TRUE) |\u003e \n  group_by(test, site, location) |\u003e\n  summarize(mean = mean(values, na.rm = TRUE),\n            std_error = sd(values, na.rm = TRUE) / sqrt(n()),\n            count=n()\n            )\n# Provide some example code here\nggplot(data = mean_location,\n       mapping = aes(x = site,\n                     y = mean,\n                     fill = location)) +\n  geom_col(position = position_dodge2()) +\n  facet_wrap(~test, scales = \"free\")+\n  theme_minimal() + \n  labs(title = \"Contamination around pit latrines\",\n       subtitle = \"Mean of six soil quality tests displayed by site\",\n       x = \"Site #\",\n       y = \"Mean values\",\n       fill = \"Sample location around the pit\",\n       caption = \"Data collected from Dec 2021-Dec 2022\")+\n    theme(panel.grid.minor = element_blank(), \n        panel.grid.major.y = element_blank())\n```\n\n## License\n\nData are available as\n[CC-BY](https://github.com/openwashdata/breathablepitlat/blob/main/LICENSE.md).\n\n## Citation\n\nPlease cite this package using:\n\n```{r}\ncitation(\"breathablepitlat\")\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fopenwashdata%2Fbreathablepitlat","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fopenwashdata%2Fbreathablepitlat","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fopenwashdata%2Fbreathablepitlat/lists"}