{"id":20152710,"url":"https://github.com/ozankiratli/haploid-bottleneck","last_synced_at":"2025-08-10T23:47:10.552Z","repository":{"id":183299021,"uuid":"54600694","full_name":"ozankiratli/haploid-bottleneck","owner":"ozankiratli","description":"An individual based simulation for haploid populations with bottlenecking feature","archived":false,"fork":false,"pushed_at":"2024-06-26T22:20:34.000Z","size":24,"stargazers_count":0,"open_issues_count":1,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-01-13T12:19:19.003Z","etag":null,"topics":["cplusplus","simulation-modeling"],"latest_commit_sha":null,"homepage":"","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ozankiratli.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2016-03-23T23:44:28.000Z","updated_at":"2024-06-30T03:18:04.000Z","dependencies_parsed_at":"2024-11-14T00:15:40.708Z","dependency_job_id":null,"html_url":"https://github.com/ozankiratli/haploid-bottleneck","commit_stats":null,"previous_names":["evolozzy/haploid-bottleneck","ozankiratli/haploid-bottleneck"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ozankiratli%2Fhaploid-bottleneck","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ozankiratli%2Fhaploid-bottleneck/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ozankiratli%2Fhaploid-bottleneck/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ozankiratli%2Fhaploid-bottleneck/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ozankiratli","download_url":"https://codeload.github.com/ozankiratli/haploid-bottleneck/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":241592526,"owners_count":19987377,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["cplusplus","simulation-modeling"],"created_at":"2024-11-13T23:13:35.797Z","updated_at":"2025-03-03T01:19:39.029Z","avatar_url":"https://github.com/ozankiratli.png","language":"C++","funding_links":[],"categories":[],"sub_categories":[],"readme":"# haploid-bottleneck\nAn individual based simulation for haploid populations with bottlenecking feature. \n\nUNDER DEVELOPMENT\n\n*** First working copy\n\n*** Bash script development is in progress\n\n*** A full user manual and instructions will be available soon. \n\nInstructions:\n\nLINUX:\n\n- copy \"simulation.cpp\", \"build.sh\", and \"run.sh\" to same folder. \n- Change parameters according to your needs in build.sh\n- change mode of build.sh and run.sh to 755 or +x with chmod +x build.sh\n- run build.sh with intended number of replicates, (default=20)  \"./build.sh 5\"\n- run run.sh with intended number of threads (default=1) \"./run.sh 2\"\n\n\nP.S. I haven't developed this project for some time, but if you need help with it, send me an [email](mailto:ozankiratli@protonmail.com).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fozankiratli%2Fhaploid-bottleneck","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fozankiratli%2Fhaploid-bottleneck","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fozankiratli%2Fhaploid-bottleneck/lists"}