{"id":17873988,"url":"https://github.com/pmassicotte/eemr","last_synced_at":"2025-03-21T22:31:41.768Z","repository":{"id":56936841,"uuid":"43953922","full_name":"PMassicotte/eemR","owner":"PMassicotte","description":"Utilities for pre-processing emission-excitation-matrix (EEM). 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Please edit that file --\u003e\n\n```{r, echo = FALSE}\nknitr::opts_chunk$set(\n  fig.path = \"inst/images/README-\"\n)\n```\n\n## eemR\n\n\u003c!-- badges: start --\u003e\n[![Package-License](https://img.shields.io/badge/license-GPL%20%28%3E=%202%29-brightgreen.svg?style=flat)](http://www.gnu.org/licenses/gpl-2.0.html) [![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/eemR)](https://cran.r-project.org/package=eemR) [![Downloads](http://cranlogs.r-pkg.org/badges/eemR?color=brightgreen)](https://www.r-pkg.org:443/pkg/eemR) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3257526.svg)](https://doi.org/10.5281/zenodo.3257526)\n[![Codecov test coverage](https://codecov.io/gh/PMassicotte/eemR/branch/main/graph/badge.svg)](https://app.codecov.io/gh/PMassicotte/eemR?branch=main)\n[![R build status](https://github.com/PMassicotte/eemR/workflows/R-CMD-check/badge.svg)](https://github.com/PMassicotte/eemR/actions)\n\u003c!-- badges: end --\u003e\n\nThe **eemR** package implements various functions used calculate metrics from excitation-emission matrix (EEM) as well as to preform pre-processing corrections before PARAFAC analysis.\n\n\nThe latest release of the package from CRAN can be installed with:\n\n```{r, eval = FALSE}\ninstall.packages(\"eemR\")\n```\n\nThe latest development version of the package can be installed with:\n\n```{r install, eval = FALSE}\ndevtools::install_github(\"PMassicotte/eemR\")\n```\n\n## Vignette\n\nA detailed vignette presenting the package which can be viewed using:\n\n```{r, eval = FALSE}\nvignette(topic = \"introduction\", package = \"eemR\")\n```\n## Supported spectrophotometers\n\nAt the moment, EEMs generated by the following spectrofluorometer are officially supported.\n\n- Cary Eclipse `.csv` files\n\n- Aqualog `.dat` files\n\n- Shimadzu `.TXT` files\n\n- Fluoromax-4 `.dat` files\n\n- Hitachi F-7000 FL `.TXT` files\n\nEEM can be read using the `eem_read()` function. Please fill an [issue](https://github.com/PMassicotte/eemR/issues) if you have other file formats you would like to add to the package. You can also write your own [import function](http://pmassicotte.github.io/eemR/articles/custom-import-function.html)!\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fpmassicotte%2Feemr","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fpmassicotte%2Feemr","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fpmassicotte%2Feemr/lists"}