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This was what Python badly needed for years.\"* - Heng Li\n\n## Deprecation note!\nThis repo currently hosts the \"version 0\" of pyranges. A redesigned, faster version1 is available at https://github.com/pyranges/pyranges_1.x\nVersion 1 will soon replace version 0. We encourage existing v0 users to migrate to v1 (see guide at https://pyranges1.readthedocs.io/en/latest/migration_guide.html), and new users to directly adopt v1. Read about v1 in our preprint at https://doi.org/10.64898/2025.12.11.693639\n\n\n## Documentation\n\nThe pyranges documentation, including installation instructions, API, tutorial, and how-to-pages, of version 0 is available at \u003chttps://pyranges.readthedocs.io/\u003e\n\n## Features\n\n  - fast\n  - memory-efficient\n  - featureful\n  - pythonic/pandastic\n  - supports chaining with a terse syntax\n  - uses Pandas DataFrames, so the whole Python data science stack works on PyRanges\n\n## Paper/Cite\n\nStovner EB, Sætrom P (2020) PyRanges: efficient comparison of genomic intervals in Python. *Bioinformatics 36(3):918-919*  http://dx.doi.org/10.1093/bioinformatics/btz615\n\n## Supporting pyranges\n\n  - most importantly, cite pyranges if you use it. It is the main metric funding sources care about.\n  - use pyranges in Stack Overflow/biostars questions and answers\n  - star the repo (possibly important for github visibility and as a proxy for project popularity)\n  - if you are a business using pyranges, please give to one of the charities listed at https://www.givewell.org/\n\n## Asking for help\n\nIf you encounter bugs, or the documentation is not enough a cannot accomplish a specific task of interest, or if you'd like new features implemented, open an Issue at github: https://github.com/pyranges/pyranges/issues\n\n## Contributing to pyranges\n\nPyranges accepts code contributions in form of pull request. For details, visit [https://pyranges.readthedocs.io/developer_guide.html](https://pyranges.readthedocs.io/en/latest/developer_guide.html)\n\n\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fpyranges%2Fpyranges","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fpyranges%2Fpyranges","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fpyranges%2Fpyranges/lists"}