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The SAM/BAM format is a way to store efficiently large\nnumbers of alignments (`Li 2009`_), such as those routinely created by\nnext-generation sequencing methods.\n\nPysam is a lightweight wrapper of the samtools_ C-API. Pysam also\nincludes an interface for tabix_.\n\nIf you are using the conda packaging manager (e.g. miniconda or anaconda),\nyou can install pysam from the `bioconda channel \u003chttps://bioconda.github.io/\u003e`_::\n\n   conda config --add channels bioconda\n   conda config --add channels conda-forge\n   conda config --set channel_priority strict\n   conda install pysam\n\nInstallation through bioconda is the recommended way to install pysam\nas it resolves non-python dependencies and uses pre-configured\ncompilation options. 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