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logo](docs/img/dadaist2.png)](https://quadram-institute-bioscience.github.io/dadaist2/)\n\n[![release](https://img.shields.io/github/v/release/quadram-institute-bioscience/dadaist2?label=github%20release)](https://github.com/quadram-institute-bioscience/dadaist2/releases)\n[![version](\nhttps://anaconda.org/bioconda/dadaist2/badges/version.svg)](https://bioconda.github.io/recipes/dadaist2/README.html)\n[![Conda](https://anaconda.org/bioconda/dadaist2/badges/downloads.svg)](https://bioconda.github.io/recipes/dadaist2/README.html)\n[![Dadaist-CI](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/test-dadaist.yaml/badge.svg?branch=master)](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/test-dadaist.yaml)\n\n\nStandalone wrapper for [DADA2](https://benjjneb.github.io/dada2/index.html) package, to quickly generate a feature table and a\nset of representative sequences from a folder with Paired End Illumina reads.\n\n## [Dadaist2 stable](https://quadram-institute-bioscience.github.io/dadaist2)\n\nPlease check the [**legacy documentation**](https://quadram-institute-bioscience.github.io/dadaist1-docs/) and tutorials\nfor installation and usage notes.\n\n### Dadaist2 2.x under development\n\nPlease check the [online documentation](https://quadram-institute-bioscience.github.io/dadaist2) for dev\n\n\n## Cite \n\n\u003cdiv data-badge-popover=\"right\" data-badge-type=\"donut\" data-doi=\"10.3390/ijms22105309\" data-hide-no-mentions=\"true\" class=\"altmetric-embed\"\u003e\u003c/div\u003e\n\nAnsorge, R., Birolo, G., James, S. A., \u0026 Telatin, A. (2021). Dadaist2: A Toolkit to Automate and Simplify Statistical Analysis and Plotting of Metabarcoding Experiments. _International journal of molecular sciences_, 22(10), 5309. [10.3390/ijms22105309](https://doi.org/10.3390/ijms22105309)\n \n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquadram-institute-bioscience%2Fdadaist2","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fquadram-institute-bioscience%2Fdadaist2","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquadram-institute-bioscience%2Fdadaist2/lists"}